RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 SLC30A8Q8IWU4 369 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 C9orf106Q8NAJ2 232 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 PCYOX1LQ8NBM8 494 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 NAXEQ8NCW5 288 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 SMPDL3BQ92485 455 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 DOCK7Q96N67 2140 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 CPPED1Q9BRF8 314 aaPredicted RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 SPATA9Q9BWV2 254 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 PINK1Q9BXM7 581 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 EVA1AQ9H8M9 152 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 RNF122Q9H9V4 155 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 GLRX2Q9NS18 164 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 DNAJB12Q9NXW2 375 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 MCTS1Q9ULC4 181 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 CAPN7Q9Y6W3 813 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 HCFC1P51610 2035 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 CFAP73A6NFT4 308 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-202ENST00000398153 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 TGM6O95932 706 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 COX6B1P14854 86 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 CD1EP15812 388 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 IGFBP2P18065 325 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 BMP5P22003 454 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 SLC6A2P23975 617 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
HDDC2-202ENST00000398153 EIF1AXP47813 144 aaKnown RBP12.83□□□□□ -0.36
HDDC2-202ENST00000398153 PCYT1AP49585 367 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 CARD18P57730 90 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 CDK6Q00534 326 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 PON3Q15166 354 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 SERPINA11Q86U17 422 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 OR10D3Q8NH80 312 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 RP9Q8TA86 221 aaKnown RBP12.83□□□□□ -0.36
HDDC2-202ENST00000398153 CNOT9Q92600 299 aaKnown RBP12.83□□□□□ -0.36
HDDC2-202ENST00000398153 CPNE4Q96A23 557 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF607Q96SK3 696 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 NPAS1Q99742 590 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 UCK2Q9BZX2 261 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 GID8Q9NWU2 228 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 JKAMPQ9P055 326 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF443Q9Y2A4 671 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-202ENST00000398153 ADGRG4Q8IZF6 3080 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 CELSR2Q9HCU4 2923 aa12.83□□□□□ -0.36
HDDC2-202ENST00000398153 A0A0J9YW62 118 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 PRORSD1PA6NEY8 169 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 CLDN24A6NM45 220 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 FAM90A27PA6NNH2 459 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 H0YC42 278 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 FBP2O00757 339 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 EFNA2O43921 213 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 SERPINB7O75635 380 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 SYNGR4O95473 234 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 NUDT7P0C024 238 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 COL8A1P27658 744 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 PRKAR1BP31321 381 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 LSP1P33241 339 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 SLC1A3P43003 542 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 RNF144AP50876 292 aaPredicted RBP12.82□□□□□ -0.36
HDDC2-202ENST00000398153 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
HDDC2-202ENST00000398153 MERTKQ12866 999 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 EPS8Q12929 822 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF311Q5JNZ3 666 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 PLEKHM3Q6ZWE6 761 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 CPLX4Q7Z7G2 160 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 C11orf65Q8NCR3 313 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 HIPK4Q8NE63 616 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 OR8J3Q8NGG0 315 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 FNDC9Q8TBE3 224 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 OSTF1Q92882 214 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 MAL2Q969L2 176 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 INTS12Q96CB8 462 aaKnown RBP12.82□□□□□ -0.36
HDDC2-202ENST00000398153 LRRC58Q96CX6 371 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 REXO5Q96IC2 774 aaKnown RBP12.82□□□□□ -0.36
HDDC2-202ENST00000398153 CCDC106Q9BWC9 280 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 PRRG4Q9BZD6 226 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 IKZF5Q9H5V7 419 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 KAT8Q9H7Z6 458 aaKnown RBP12.82□□□□□ -0.36
HDDC2-202ENST00000398153 GP6Q9HCN6 339 aa12.82□□□□□ -0.36
HDDC2-202ENST00000398153 UNC79Q9P2D8 2635 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 TNFSF11O14788 317 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 SLC7A1P30825 629 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 RYKP34925 604 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 SFTPDP35247 375 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 IDH2P48735 452 aaKnown RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 RAC3P60763 192 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 COPZ1P61923 177 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 PLAURQ03405 335 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 SCARB2Q14108 478 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms