RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 ACER3Q9NUN7 267 aa14.96□□□□□ -0.01
APTR-201ENST00000398043 THUMPD1Q9NXG2 353 aaKnown RBP14.96□□□□□ -0.01
APTR-201ENST00000398043 DNAJB12Q9NXW2 375 aaKnown RBP14.96□□□□□ -0.01
APTR-201ENST00000398043 PACSIN3Q9UKS6 424 aa14.96□□□□□ -0.01
APTR-201ENST00000398043 CHST2Q9Y4C5 530 aa14.96□□□□□ -0.01
APTR-201ENST00000398043 CSMD2Q7Z408 3487 aa14.96□□□□□ -0.02
APTR-201ENST00000398043 A0A0G2JND7 137 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 FAM221AA4D161 298 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 EEF1E1-BLOC1S5C9J1V9 151 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 MSTNO14793 375 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 EEF1E1O43324 174 aaKnown RBP14.95□□□□□ -0.02
APTR-201ENST00000398043 CYP7B1O75881 506 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 BCHEP06276 602 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 DBIP07108 87 aaKnown RBP14.95□□□□□ -0.02
APTR-201ENST00000398043 FCGR2AP12318 317 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 NCF2P19878 526 aaPredicted RBP14.95□□□□□ -0.02
APTR-201ENST00000398043 ME2P23368 584 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 UQCRC1P31930 480 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 SFTPDP35247 375 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 PCYT1AP49585 367 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 SORDQ00796 357 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 FADDQ13158 208 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 SELENBP1Q13228 472 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 SGCBQ16585 318 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 TMEM176BQ3YBM2 270 aaPredicted RBP14.95□□□□□ -0.02
APTR-201ENST00000398043 ARFGAP2Q8N6H7 521 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 TMEM19Q96HH6 336 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 CCDC106Q9BWC9 280 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 RABEP2Q9H5N1 569 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 IKZF5Q9H5V7 419 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 SLC24A3Q9HC58 644 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 MCCC2Q9HCC0 563 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 A4GALTQ9NPC4 353 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 FGFR1OP2Q9NVK5 253 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 GALNT8Q9NY28 637 aa14.95□□□□□ -0.02
APTR-201ENST00000398043 CDHR4A6H8M9 788 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 FAAHO00519 579 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 ATP8B1O43520 1251 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 GPX2P18283 190 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 PEX19P40855 299 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 CRISP3P54108 245 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 CARD18P57730 90 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 GUCY1A3Q02108 690 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 TLE4Q04727 773 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 ZNF239Q16600 458 aaKnown RBP14.94□□□□□ -0.02
APTR-201ENST00000398043 RPS26P11Q5JNZ5 115 aaPredicted RBP14.94□□□□□ -0.02
APTR-201ENST00000398043 MRPL2Q5T653 305 aaKnown RBP14.94□□□□□ -0.02
APTR-201ENST00000398043 PRAMEF8Q5VWM4 474 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 PRAMEF7Q5VXH5 474 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 ZNF474Q6S9Z5 364 aaPredicted RBP14.94□□□□□ -0.02
APTR-201ENST00000398043 PLEKHM3Q6ZWE6 761 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 LUZP2Q86TE4 346 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 RETREG3Q86VR2 466 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 VRK2Q86Y07 508 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 DPP10Q8N608 796 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 RNF128Q8TEB7 428 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 TSPEARQ8WU66 669 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 WDR60Q8WVS4 1066 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 TMEM234Q8WY98 164 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 MAL2Q969L2 176 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 LURAP1Q96LR2 239 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 RBM24Q9BX46 236 aaKnown RBP14.94□□□□□ -0.02
APTR-201ENST00000398043 TMEM120AQ9BXJ8 343 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 RAD21L1Q9H4I0 556 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 BCL2L10Q9HD36 194 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 CALML5Q9NZT1 146 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 CRIM1Q9NZV1 1036 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 TRIM33Q9UPN9 1127 aa14.94□□□□□ -0.02
APTR-201ENST00000398043 A0A0G2JPF8 293 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 GJE1A6NN92 205 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 HNRNPCL2B2RXH8 293 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 HNRNPCL3B7ZW38 293 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 AP3D1O14617 1153 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 HNRNPCL1O60812 293 aaKnown RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 SS18L1O75177 396 aaPredicted RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 HNRNPCL4P0DMR1 293 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 CD8BP10966 210 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 IL7RP16871 459 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 ACAA2P42765 397 aaKnown RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 PDSS1Q5T2R2 415 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 C3orf33Q6P1S2 294 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 ZNF836Q6ZNA1 936 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 FAM214BQ7L5A3 538 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 ADGRG3Q86Y34 549 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 PEX5LQ8IYB4 626 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 CNEP1R1Q8N9A8 125 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 OR52P1PQ8NH57 321 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 CPNE4Q96A23 557 aaPredicted RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 LRRC46Q96FV0 321 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 GMPPAQ96IJ6 420 aaPredicted RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 ZNF317Q96PQ6 595 aaPredicted RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 CPPED1Q9BRF8 314 aaPredicted RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 RLIMQ9NVW2 624 aa14.93□□□□□ -0.02
APTR-201ENST00000398043 MCTS1Q9ULC4 181 aaKnown RBP14.93□□□□□ -0.02
APTR-201ENST00000398043 THBS1P07996 1170 aa14.92□□□□□ -0.02
APTR-201ENST00000398043 ARAFP10398 606 aa14.92□□□□□ -0.02
APTR-201ENST00000398043 RYKP34925 604 aa14.92□□□□□ -0.02
APTR-201ENST00000398043 APOBEC1P41238 236 aaKnown RBP14.92□□□□□ -0.02
APTR-201ENST00000398043 KIR2DL3P43628 341 aa14.92□□□□□ -0.02
APTR-201ENST00000398043 SIRPAP78324 504 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms