RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 COMTD1Q86VU5 262 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ADGRF3Q8IZF5 1079 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF563Q8TA94 476 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TRIP12Q14669 1992 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NAP1L6A6NFF2 107 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 KDM4EB2RXH2 506 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NEDD8-MDP1E9PL57 170 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 GTPBP1O00178 669 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 KLF4O43474 513 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 CSO75390 466 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ETHE1O95571 254 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 AKR1C4P17516 323 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 CCR6P51684 374 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PEA15Q15121 130 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF79Q15937 498 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 FAM46CQ5VWP2 391 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PRSS42Q7Z5A4 293 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 LRRC28Q86X40 367 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 GPR32P1Q8NGA4 272 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 BRIX1Q8TDN6 353 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NUDT8Q8WV74 236 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 GAS2L1Q99501 681 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZDHHC5Q9C0B5 715 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 CYSLTR2Q9NS75 346 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 MUTYHQ9UIF7 546 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 RCE1Q9Y256 329 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ANKRD36A6QL64 1941 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TRAV20A0A0B4J274 112 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 UNC119BA6NIH7 251 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 HEPACAM2A8MVW5 462 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 LEFTY2O00292 366 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PQBP1O60828 265 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NFATC1O95644 943 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 SFTPBP07988 381 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 THBS1P07996 1170 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ALPPL2P10696 532 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PPP3CBP16298 524 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 MPEG1Q2M385 716 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PCGF3Q3KNV8 242 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ABCA11PQ4W5N1 156 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 KANSL1Q7Z3B3 1105 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TMPRSS12Q86WS5 348 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TMC8Q8IU68 726 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 LNX2Q8N448 690 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TM9SF4Q92544 642 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TFGQ92734 400 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 C3orf49Q96BT1 292 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 PELOQ9BRX2 385 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 OR52A5Q9H2C5 316 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 SPHK2Q9NRA0 654 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 IMP3Q9NV31 184 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ABRACLQ9P1F3 81 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF223Q9UK11 482 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 RASD1Q9Y272 281 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 MEIS3P1A6NDR6 274 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF705GA8MUZ8 300 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 LILRB5O75023 590 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 FAM157BP0CG42 384 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 BSGP35613 385 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 SGSHP51688 502 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 NKX6-1P78426 367 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZNF362Q5T0B9 420 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 OR6M1Q8NGM8 313 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ST7LQ8TDW4 575 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ZFPM2Q8WW38 1151 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 ELP4Q96EB1 424 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 DCLRE1CQ96SD1 692 aaKnown RBP5.09□□□□□ -1.59
PTPRD-205ENST00000397611 TIMM29Q9BSF4 260 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 CXorf36Q9H7Y0 433 aa5.09□□□□□ -1.59
PTPRD-205ENST00000397611 MAS1P04201 325 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 SLC35G4P0C7Q5 338 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 APEHP13798 732 aaKnown RBP5.09□□□□□ -1.6
PTPRD-205ENST00000397611 TIMP2P16035 220 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 UGT2B7P16662 529 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 SLC1A3P43003 542 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 STXBP1P61764 594 aaKnown RBP5.09□□□□□ -1.6
PTPRD-205ENST00000397611 PUS10Q3MIT2 529 aaKnown RBP5.09□□□□□ -1.6
PTPRD-205ENST00000397611 MRM1Q6IN84 353 aaKnown RBP5.09□□□□□ -1.6
PTPRD-205ENST00000397611 WDR53Q7Z5U6 358 aaPredicted RBP5.09□□□□□ -1.6
PTPRD-205ENST00000397611 BCDIN3DQ7Z5W3 292 aaKnown RBP5.09□□□□□ -1.6
PTPRD-205ENST00000397611 KCTD20Q7Z5Y7 419 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 ADIPOR2Q86V24 386 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 SERPINA12Q8IW75 414 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 OR1J4Q8NGS1 313 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 OR4Q3Q8NH05 313 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 DCUN1D4Q92564 292 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 RBM18Q96H35 190 aaKnown RBP5.09□□□□□ -1.6
PTPRD-205ENST00000397611 SLC25A18Q9H1K4 315 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 CEP290O15078 2479 aa5.09□□□□□ -1.6
PTPRD-205ENST00000397611 IGLON5A6NGN9 336 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CCDC85CA6NKD9 419 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SLC22A31A6NKX4 558 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TSTD3H0UI37 97 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SLC25A12O75746 678 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 POP7O75817 140 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 UBBP0CG47 229 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 UBCP0CG48 685 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 OR12D1P0DN82 309 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 GNSP15586 552 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 GPR4P46093 362 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 811.1 ms