RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PRSS27Q9BQR3 290 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 ANGPTL4Q9BY76 406 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 HES7Q9BYE0 225 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 KLHL1Q9NR64 748 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 SH3PXD2BA1X283 911 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 MITFO75030 526 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-204ENST00000397443 SLC25A12O75746 678 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 NEURL1O76050 574 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 WISP1O95388 367 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 ALPLP05186 524 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 CCNA2P20248 432 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 DAPP51397 102 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 SOX8P57073 446 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 QPRTQ15274 297 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 ZIK1Q3SY52 487 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-204ENST00000397443 ULK3Q6PHR2 472 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 ARSKQ6UWY0 536 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 RRM2BQ7LG56 351 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 WDSUB1Q8N9V3 476 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 AQP11Q8NBQ7 271 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 OR4K17Q8NGC6 315 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 GPR119Q8TDV5 335 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 C3orf49Q96BT1 292 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 NRBF2Q96F24 287 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 RBM4BQ9BQ04 359 aaKnown RBP19.29■□□□□ 0.68
CPNE1-204ENST00000397443 FUZQ9BT04 418 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 RBM4Q9BWF3 364 aaKnown RBP19.29■□□□□ 0.68
CPNE1-204ENST00000397443 OSBPL10Q9BXB5 764 aa19.29■□□□□ 0.68
CPNE1-204ENST00000397443 C7orf72A4D263 438 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 FAAHO00519 579 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 PIP5K1CO60331 668 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 LYPD3O95274 346 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 ALDH3A2P51648 485 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 ARG2P78540 354 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 PPP2R2BQ00005 443 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 GPALPP1Q8IXQ4 340 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 POLR2J2Q9GZM3 115 aaKnown RBP19.28■□□□□ 0.68
CPNE1-204ENST00000397443 POLR2J3Q9H1A7 115 aaKnown RBP19.28■□□□□ 0.68
CPNE1-204ENST00000397443 TIMMDC1Q9NPL8 285 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 TAS2R10Q9NYW0 307 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 DKK4Q9UBT3 224 aa19.28■□□□□ 0.68
CPNE1-204ENST00000397443 C1QTNF9BB2RNN3 333 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 CHP2O43745 196 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 GASTP01350 101 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 C1QTNF9P0C862 333 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 TLE3Q04726 772 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 SLC39A7Q92504 469 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 GNRHR2Q96P88 292 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 ZNF184Q99676 751 aaPredicted RBP19.27■□□□□ 0.68
CPNE1-204ENST00000397443 NIPSNAP1Q9BPW8 284 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.27■□□□□ 0.685e-12■■■■□ 21.5
CPNE1-204ENST00000397443 DEPPQ9NTK1 212 aa19.27■□□□□ 0.68
CPNE1-204ENST00000397443 ANKUB1A6NFN9 424 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 SHISA8B8ZZ34 492 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 GP1BBP13224 206 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 IGFBP5P24593 272 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 TACR3P29371 465 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 SLC1A3P43003 542 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 MFAP5Q13361 173 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 NRMQ8IXM6 262 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 PFN4Q8NHR9 129 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 ACOT11Q8WXI4 607 aaPredicted RBP19.27■□□□□ 0.67
CPNE1-204ENST00000397443 NPAS1Q99742 590 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 GABARAPL1Q9H0R8 117 aa19.27■□□□□ 0.67
CPNE1-204ENST00000397443 OR5H15A6NDH6 313 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 SNAP29O95721 258 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 THRBP10828 461 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 UGT2B15P54855 530 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 TMEM81Q6P7N7 255 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 PLCZ1Q86YW0 608 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 PACRGLQ8N7B6 248 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 OR2M3Q8NG83 312 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 OR1J4Q8NGS1 313 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 DNAJA4Q8WW22 397 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-204ENST00000397443 TMEM239Q8WW34 195 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 ANKRD19PQ9H560 264 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 KRT84Q9NSB2 600 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 TMEFF2Q9UIK5 374 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-204ENST00000397443 CSAG2Q9Y5P2 127 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 MPDZO75970 2070 aa19.26■□□□□ 0.67
CPNE1-204ENST00000397443 ELOA3DA6NLF2 546 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ZNF41P51814 821 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ELOA3BQ3SY89 546 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 BROXQ5VW32 411 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ZNF770Q6IQ21 691 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-204ENST00000397443 PGBD2Q6P3X8 592 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 LRRC69Q6ZNQ3 347 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 PRICKLE2Q7Z3G6 844 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ELOA3Q8NG57 546 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 DNAJC9Q8WXX5 260 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 MED12Q93074 2177 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 DNAJA3Q96EY1 480 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 FAM46AQ96IP4 442 aaKnown RBP19.25■□□□□ 0.67
CPNE1-204ENST00000397443 FRMD6Q96NE9 622 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 SSUH2Q9Y2M2 353 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 PTPRQQ9UMZ3 2332 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ANKRD33BA6NCL7 494 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 MSX1P28360 303 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 RFC3P40938 356 aa19.25■□□□□ 0.67
CPNE1-204ENST00000397443 ALDH6A1Q02252 535 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms