RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CHMP1BQ7LBR1 199 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 ADGRE4PQ86SQ3 457 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 CCDC71Q8IV32 467 aaPredicted RBP19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF440Q8IYI8 595 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 PSMG3-AS1Q96PY0 264 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 LRRC37BQ96QE4 947 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF607Q96SK3 696 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 ARMC7Q9H6L4 198 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 CALHM2Q9HA72 323 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 EFCAB1Q9HAE3 211 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 ACER3Q9NUN7 267 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 CHST2Q9Y4C5 530 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 A0A0G2JNJ9 132 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 CFAP73A6NFT4 308 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 EFNA2O43921 213 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 GKN3PP0CG01 181 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 GP1BBP13224 206 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 AGAP20933 346 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 IDH2P48735 452 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 PCBP3P57721 371 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 MERTKQ12866 999 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 EPS8Q12929 822 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 SELENBP1Q13228 472 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 ART3Q13508 389 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 ARPINQ7Z6K5 226 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 GRAMD2AQ8IUY3 354 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC30A8Q8IWU4 369 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 LILRA2Q8N149 483 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 TNIP2Q8NFZ5 429 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 CLCF1Q9UBD9 225 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 Q9UFV3 132 aa19.08■□□□□ 0.64
TSPAN4-206ENST00000397408 MBD3L4A6NDZ8 208 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 MBD3L3A6NE82 208 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 MBD3L5A6NJ08 208 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 TOXO94900 526 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 UQCRBP14927 111 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 SHC1P29353 583 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 CHRNB4P30926 498 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 PRKAR1BP31321 381 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 SFTPDP35247 375 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 RPS3AP61247 264 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 CDSNQ15517 529 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 VMACQ2NL98 169 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 POMZP3Q6PJE2 187 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 PLEKHM3Q6ZWE6 761 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 CALHM3Q86XJ0 350 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 ANKS4BQ8N8V4 417 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 C9orf106Q8NAJ2 232 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 ATP6V1C2Q8NEY4 427 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 MBD3L2Q8NHZ7 208 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 ASB5Q8WWX0 329 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 KLHL15Q96M94 604 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 GPATCH1Q9BRR8 931 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 PINK1Q9BXM7 581 aa19.07■□□□□ 0.64
TSPAN4-206ENST00000397408 CACNA1CQ13936 2221 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 SERPINB7O75635 380 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 CLDN1O95832 211 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 TIMP3P35625 211 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 EIF1AXP47813 144 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 CPA2P48052 419 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 DLX5P56178 289 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 CTU2Q2VPK5 515 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 C3orf33Q6P1S2 294 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 DHRS4L2Q6PKH6 230 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 ESPNLQ6ZVH7 1005 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 ZNF550Q7Z398 422 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 GRINAQ7Z429 371 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 ARMC8Q8IUR7 673 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 NAXEQ8NCW5 288 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 CA5BP1Q8WTZ4 195 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 WNT2BQ93097 391 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 REXO5Q96IC2 774 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 ZNF845Q96IR2 970 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 ADGRG7Q96K78 797 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 DOCK7Q96N67 2140 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 UCN2Q96RP3 112 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 RSPO3Q9BXY4 272 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 CMTM6Q9NX76 183 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 USP22Q9UPT9 525 aa19.06■□□□□ 0.64
TSPAN4-206ENST00000397408 UTP20O75691 2785 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 A0A0J9YW62 118 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 PRORSD1PA6NEY8 169 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 CCT8L1PA6NM43 557 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 GJE1A6NN92 205 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 FAAHO00519 579 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 TNFSF11O14788 317 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 FRS3O43559 492 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 IL2RAP01589 272 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 OPN1SWP03999 348 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 PRG2P13727 222 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 CEACAM8P31997 349 aaPredicted RBP19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 ACAA2P42765 397 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 SGCBQ16585 318 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 INTS11Q5TA45 600 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 HACD2Q6Y1H2 254 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 P4HA3Q7Z4N8 544 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 COMTD1Q86VU5 262 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 CCDC197Q8NCU1 140 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 OR10D3Q8NH80 312 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 OR2V1Q8NHB1 315 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms