RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
NEDD9-203ENST00000397378 C1QTNF12Q5T7M4 302 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ZCCHC12Q6PEW1 402 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ZDHHC24Q6UX98 284 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 IKBIPQ70UQ0 350 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 GALNT5Q7Z7M9 940 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF100Q8IYN0 542 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 SLC16A11Q8NCK7 471 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 CDC26Q8NHZ8 85 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 PHOSPHO1Q8TCT1 267 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF764Q96H86 408 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-203ENST00000397378 MUS81Q96NY9 551 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 SORCS2Q96PQ0 1159 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 SNX18Q96RF0 628 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 NAPGQ99747 312 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-203ENST00000397378 IQCGQ9H095 443 aaKnown RBP8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ACSS3Q9H6R3 686 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 FKRPQ9H9S5 495 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 ICAM5Q9UMF0 924 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 USP22Q9UPT9 525 aa8.24□□□□□ -1.09
NEDD9-203ENST00000397378 UTP11Q9Y3A2 253 aaKnown RBP8.24□□□□□ -1.09
NEDD9-203ENST00000397378 IGKV3D-15A0A087WSY6 115 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 NPIPA5A0A0B4J1W7 369 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 A0A1W2PNR3 127 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 CIB4A0PJX0 185 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 C9JVG2 144 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 NPIPA7E9PJI5 369 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 M0R1B8 84 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 ETV2O00321 342 aaPredicted RBP8.23□□□□□ -1.09
NEDD9-203ENST00000397378 PDPK1O15530 556 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 NUDT14O95848 222 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 INHBAP08476 426 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 NPIPA8P0DM63 369 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 IMPDH1P20839 514 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 EPHA1P21709 976 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 GPC1P35052 558 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 PHBP35232 272 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 FRKP42685 505 aaPredicted RBP8.23□□□□□ -1.09
NEDD9-203ENST00000397378 SERPINB9P50453 376 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 PRKAG1P54619 331 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 PKNOX1P55347 436 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 PHC1P78364 1004 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 CHRNEQ04844 493 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 LCP2Q13094 533 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 PDK3Q15120 406 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 DUSP5Q16690 384 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 MST1LQ2TV78 715 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 KLHL26Q53HC5 615 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 SPDYAQ5MJ70 313 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 OR7E24Q6IFN5 339 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 C3orf33Q6P1S2 294 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 CBLN3Q6UW01 205 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 GLCCI1Q86VQ1 547 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 COX18Q8N8Q8 333 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 SPATA4Q8NEY3 305 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 ATP6V1C2Q8NEY4 427 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 ZFP28Q8NHY6 868 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 GPR119Q8TDV5 335 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 HPS1Q92902 700 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
NEDD9-203ENST00000397378 METTL2AQ96IZ6 378 aaKnown RBP8.23□□□□□ -1.09
NEDD9-203ENST00000397378 MS4A4EQ96PG1 132 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 TMEM237Q96Q45 408 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 BTBD2Q9BX70 525 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 FUT8Q9BYC5 575 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 RAB17Q9H0T7 212 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 UNKLQ9H9P5 680 aaKnown RBP8.23□□□□□ -1.09
NEDD9-203ENST00000397378 TAS2R16Q9NYV7 291 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 EMC3Q9P0I2 261 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 MALT1Q9UDY8 824 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 TIMM22Q9Y584 194 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 ATP23Q9Y6H3 246 aa8.23□□□□□ -1.09
NEDD9-203ENST00000397378 CCT8L1PA6NM43 557 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 ESPNB1AK53 854 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 H3BNH8 94 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 OIP5O43482 229 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 TBX19O60806 448 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 SNUPNO95149 360 aaKnown RBP8.22□□□□□ -1.09
NEDD9-203ENST00000397378 ALOX5P09917 674 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 HKR1P10072 659 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 TAC1P20366 129 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 GNG11P61952 73 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 POU6F2P78424 691 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-203ENST00000397378 CCNIQ14094 377 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 TOMM34Q15785 309 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-203ENST00000397378 GABRA6Q16445 453 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 CCNJQ5T5M9 372 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 ABLIM2Q6H8Q1 611 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 NOXRED1Q6NXP6 359 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 TRIM46Q7Z4K8 759 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 UBE2J2Q8N2K1 259 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 WDR31Q8NA23 367 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF527Q8NB42 609 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 APH1AQ96BI3 265 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 ARL8AQ96BM9 186 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF524Q96C55 264 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 EGLN2Q96KS0 407 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 STACQ99469 402 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 VRK1Q99986 396 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-203ENST00000397378 SUCNR1Q9BXA5 334 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms