RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 JKAMPQ9P055 326 aa9.55□□□□□ -0.88
NUP98-205ENST00000397007 KDM4EB2RXH2 506 aaPredicted RBP9.54□□□□□ -0.88
NUP98-205ENST00000397007 SCO2O43819 266 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 CSTAP01040 98 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 OPRM1P35372 400 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 VLDLRP98155 873 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 C19orf57Q0VDD7 668 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 QPRTQ15274 297 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 GRINAQ7Z429 371 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 HMGN2P46Q86SG4 172 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 FAM57AQ8TBR7 257 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 SPATA5L1Q9BVQ7 753 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.54□□□□□ -0.88
NUP98-205ENST00000397007 KLRF1Q9NZS2 232 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 PPP4R1LQ9P1A2 415 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 PRRC2CQ9Y520 2896 aaKnown RBP9.54□□□□□ -0.88
NUP98-205ENST00000397007 TMEM72A0PK05 275 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 CFAP73A6NFT4 308 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 HS6ST1O60243 411 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ATP6V1C1P21283 382 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 EIF1P41567 113 aaKnown RBP9.54□□□□□ -0.88
NUP98-205ENST00000397007 CLK1P49759 484 aaKnown RBP9.54□□□□□ -0.88
NUP98-205ENST00000397007 OFCC1Q8IZS5 231 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 PYURFQ96I23 114 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 BOD1Q96IK1 185 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 SEPHS2Q99611 448 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 TBL1XR1Q9BZK7 514 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ARMC1Q9NVT9 282 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ATRXP46100 2492 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 SERPINA1P01009 418 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ZNF24P17028 368 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 APOBEC1P41238 236 aaKnown RBP9.54□□□□□ -0.88
NUP98-205ENST00000397007 CTBP2P56545 445 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ABLIM2Q6H8Q1 611 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ZNF550Q7Z398 422 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 VTCN1Q7Z7D3 282 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 LSRQ86X29 649 aaPredicted RBP9.54□□□□□ -0.88
NUP98-205ENST00000397007 HSH2DQ96JZ2 352 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ZNF559Q9BR84 538 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 NTN4Q9HB63 628 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 OSGIN1Q9UJX0 560 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 ZNF337Q9Y3M9 751 aa9.54□□□□□ -0.88
NUP98-205ENST00000397007 LOC102725191A0A1B0GVB3 256 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 MBD3L4A6NDZ8 208 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 MBD3L3A6NE82 208 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 MBD3L5A6NJ08 208 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 SERPINB7O75635 380 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 TOXO94900 526 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 IMPDH2P12268 514 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 KRT20P35900 424 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 SESN3P58005 492 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 RPS4XP62701 263 aaKnown RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 RAC1P63000 192 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 OC90Q02509 493 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 LTBQ06643 244 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 LARS2Q15031 903 aaKnown RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 SLC46A3Q7Z3Q1 461 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 ADPRHL1Q8NDY3 354 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 MBD3L2Q8NHZ7 208 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 RNF122Q9H9V4 155 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 M0R3H8 397 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 GNB5O14775 395 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 DNPH1O43598 174 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 CHP2O43745 196 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 OR5F1O95221 314 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 PMS2P2O95744 297 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 IL7RP16871 459 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 CEACAM8P31997 349 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 KCNJ2P63252 427 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 GK3PQ14409 553 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 SZRD1Q7Z422 152 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 CPT1CQ8TCG5 803 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 STK35Q8TDR2 534 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 PRRC1Q96M27 445 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 SLC6A15Q9H2J7 730 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 MEPEQ9NQ76 525 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 CCM2LQ9NUG4 571 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 EGFL7Q9UHF1 273 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 A0A1W2PRQ8 180 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 ARRDC5A6NEK1 342 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 CD8B2A6NJW9 211 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 OPN1SWP03999 348 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 TP53P04637 393 aaPredicted RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 GKN3PP0CG01 181 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 FKBP2P26885 142 aaKnown RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 DPP4P27487 766 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 RBM34P42696 430 aaKnown RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 HTR3AP46098 478 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 AGFG1P52594 562 aaKnown RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 ACTR3P61158 418 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 KCNC4Q03721 635 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 DGCR6Q14129 220 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 KRT73Q86Y46 540 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 CISD2Q8N5K1 135 aaKnown RBP9.53□□□□□ -0.88
NUP98-205ENST00000397007 SMYD1Q8NB12 490 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 PHOSPHO1Q8TCT1 267 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 POTEKPQ9BYX7 375 aa9.53□□□□□ -0.88
NUP98-205ENST00000397007 SLC19A3Q9BZV2 496 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms