RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 OR13C5Q8NGS8 318 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF431Q8TF32 576 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 KLHL1Q9NR64 748 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 FBXO34Q9NWN3 711 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 B3GNT2Q9NY97 397 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 MRPL39Q9NYK5 338 aaKnown RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 KCMF1Q9P0J7 381 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 KCNE5Q9UJ90 142 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF222Q9UK12 451 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ING4Q9UNL4 249 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 LEUTXA8MZ59 168 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 K7EQS6 105 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 DNAJB6O75190 326 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 RCBTB2O95199 551 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 TCRBP04435 133 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 SLC2A5P22732 501 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 NDUFS1P28331 727 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 UQCRC1P31930 480 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 SIM1P81133 766 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 CST6Q15828 149 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 RNASE12Q5GAN4 147 aaKnown RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ZBTB37Q5TC79 503 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 GARNL3Q5VVW2 1013 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 HACD4Q5VWC8 232 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 SIGIRRQ6IA17 410 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF619Q8N2I2 560 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF655Q8N720 491 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 OR4K14Q8NGD5 310 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 OR8H1Q8NGG4 311 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 YIPF5Q969M3 257 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ARSGQ96EG1 525 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF350Q9GZX5 532 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 UBE2ZQ9H832 354 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ERVMER34-1Q9H9K5 563 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 FBXL4Q9UKA2 621 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 MGAT4AQ9UM21 535 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 SIGLEC7Q9Y286 467 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 NUBP2Q9Y5Y2 271 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 A0A1W2PP55 124 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 PRR23AA6NEV1 266 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 BTN3A3O00478 584 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 ICMTO60725 284 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 APODP05090 189 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 CD3GP09693 182 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 CTHP32929 405 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 PER3P56645 1201 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 ACSM3Q53FZ2 586 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 TRMT12Q53H54 448 aaKnown RBP16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 DMKNQ6E0U4 476 aaPredicted RBP16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 SSX6Q7RTT6 188 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 OR11H4Q8NGC9 324 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 OR5J2Q8NH18 312 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 BPIFA2Q96DR5 249 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 TMEM74BQ9NUR3 256 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 CLEC4AQ9UMR7 237 aa16.96■□□□□ 0.31
PCDHA1-202ENST00000394633 TEX13CA0A0J9YWL9 993 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 PEX12O00623 359 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 MBTPS2O43462 519 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 RAB3BP20337 219 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 TAS2R43P59537 309 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 ESCO2Q56NI9 601 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 SDE2Q6IQ49 451 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 TMPRSS11FQ6ZWK6 438 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 SIAH3Q8IW03 269 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 CYB561A3Q8NBI2 242 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 SMPDL3BQ92485 455 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 PEX11GQ96HA9 241 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 OR51J1Q9H342 316 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 DIABLOQ9NR28 239 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 ELF5Q9UKW6 265 aaPredicted RBP16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC17A4Q9Y2C5 497 aa16.96■□□□□ 0.3
PCDHA1-202ENST00000394633 TRAV27A0A087WT01 109 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 A0A0B4J203 849 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 DBIP07108 87 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 NID1P14543 1247 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 CXCL3P19876 107 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 KIR2DL1P43626 348 aaPredicted RBP16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 DGCR2P98153 550 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 RUNX2Q13950 521 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 CRMP1Q14194 572 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 C2orf27AQ580R0 203 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 DCST2Q5T1A1 773 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 CD276Q5ZPR3 534 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 RPL13AP3Q6NVV1 102 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 OR4E2Q8NGC2 313 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 OR4D9Q8NGE8 314 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 ZCCHC10Q8TBK6 192 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 OR2M2Q96R28 347 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 RANBP3Q9H6Z4 567 aaPredicted RBP16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC35A3Q9Y2D2 325 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 STON1Q9Y6Q2 735 aa16.95■□□□□ 0.3
PCDHA1-202ENST00000394633 GYPBP06028 91 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 ATF1P18846 271 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 GIFP27352 417 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 NRG3P56975 720 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 ID2Q02363 134 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 RGS1Q08116 209 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 FAAH2Q6GMR7 532 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms