RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ZNF160Q9HCG1 818 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 EXOSC3Q9NQT5 275 aaKnown RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 PAK1IP1Q9NWT1 392 aaPredicted RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 IL20RAQ9UHF4 553 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 TCFL5Q9UL49 500 aa7.91□□□□□ -1.14
TDP1-203ENST00000393454 FARSAQ9Y285 508 aaKnown RBP7.91□□□□□ -1.14
TDP1-203ENST00000393454 NSG1A0A0A6YYJ2 146 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 SMIM31A0A1B0GVY4 71 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 C2orf72A6NCS6 295 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 TRIM64CA6NLI5 447 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 KLF4O43474 513 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 RGS10O43665 173 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 TLX2O43763 284 aaPredicted RBP7.9□□□□□ -1.14
TDP1-203ENST00000393454 EIF4E2O60573 245 aaKnown RBP7.9□□□□□ -1.14
TDP1-203ENST00000393454 NADKO95544 446 aaPredicted RBP7.9□□□□□ -1.14
TDP1-203ENST00000393454 FTH1P19P0C7X4 201 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 CDK4P11802 303 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 GABRB1P18505 474 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 ALDH3B2P48448 385 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 MLLT10P55197 1068 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 CDK5Q00535 292 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 AHSA2Q719I0 299 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 NDUFAF7Q7L592 441 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 GPR141Q7Z602 305 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 SPARTQ8N0X7 666 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 ESX1Q8N693 406 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 OR11G2Q8NGC1 345 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 OR8D4Q8NGM9 314 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 FANK1Q8TC84 345 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 ELP5Q8TE02 316 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 TRUB1Q8WWH5 349 aaKnown RBP7.9□□□□□ -1.14
TDP1-203ENST00000393454 IPCEF1Q8WWN9 437 aaPredicted RBP7.9□□□□□ -1.14
TDP1-203ENST00000393454 C3orf49Q96BT1 292 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 SAMD8Q96LT4 415 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 Q96MT0 163 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 SLC38A2Q96QD8 506 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 MEPEQ9NQ76 525 aaPredicted RBP7.9□□□□□ -1.14
TDP1-203ENST00000393454 DNAJC27Q9NZQ0 273 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 NDUFA13Q9P0J0 144 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 PCDHGA3Q9Y5H0 932 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 CDH10Q9Y6N8 788 aa7.9□□□□□ -1.14
TDP1-203ENST00000393454 A0A087WUJ7 227 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 ENO4A6NNW6 628 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 SOCS6O14544 535 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PRKYO43930 277 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 ENTPD6O75354 484 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 CH25HO95992 272 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 HTR1AP08908 422 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 RAB40ALP0C0E4 278 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PNMTP11086 282 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 NAGAP17050 411 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 BMP7P18075 431 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PGCP20142 388 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 CCNA2P20248 432 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 NBL1P41271 181 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PCYT1AP49585 367 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 TMED10P49755 219 aaKnown RBP7.9□□□□□ -1.15
TDP1-203ENST00000393454 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.15
TDP1-203ENST00000393454 CTBP2P56545 445 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 SNRPGP62308 76 aaKnown RBP7.9□□□□□ -1.15
TDP1-203ENST00000393454 SLC35A2P78381 396 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PMS2P3Q13401 168 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PLAG1Q6DJT9 500 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 OR5M10Q6IEU7 315 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 SLC30A6Q6NXT4 461 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 POMZP3Q6PJE2 187 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 LINC00114Q6XXX2 140 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 ZNF620Q6ZNG0 422 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 TMPRSS11FQ6ZWK6 438 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 NUP54Q7Z3B4 507 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 GLRX5Q86SX6 157 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 C10orf53Q8N6V4 93 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 OR52L1Q8NGH7 329 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 OR8J1Q8NGP2 316 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 OR13C2Q8NGS9 318 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 OR51A7Q8NH64 312 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 M1APQ8TC57 530 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 MYDGFQ969H8 173 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PLEKHA8Q96JA3 519 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 IMMP1LQ96LU5 166 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 COPS4Q9BT78 406 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 PRRG3Q9BZD7 231 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 IRF2BPLQ9H1B7 796 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 OR52D1Q9H346 318 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 DUSP21Q9H596 190 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 SLC25A19Q9HC21 320 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 CCNB1IP1Q9NPC3 277 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 WDR70Q9NW82 654 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 IL20Q9NYY1 176 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 KLRF1Q9NZS2 232 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 SDK2Q58EX2 2172 aa7.9□□□□□ -1.15
TDP1-203ENST00000393454 EXPH5Q8NEV8 1989 aa7.89□□□□□ -1.15
TDP1-203ENST00000393454 TRAV27A0A087WT01 109 aa7.89□□□□□ -1.15
TDP1-203ENST00000393454 SH3D21A4FU49 640 aa7.89□□□□□ -1.15
TDP1-203ENST00000393454 H3BSA7 217 aa7.89□□□□□ -1.15
TDP1-203ENST00000393454 MASP2O00187 686 aa7.89□□□□□ -1.15
TDP1-203ENST00000393454 CDC40O60508 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
TDP1-203ENST00000393454 FOXD2O60548 495 aaPredicted RBP7.89□□□□□ -1.15
TDP1-203ENST00000393454 RCBTB2O95199 551 aa7.89□□□□□ -1.15
TDP1-203ENST00000393454 MT-ND2P03891 347 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms