RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 IGLV3-12A0A075B6K2 115 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 FAM183AA6NL82 134 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 WWP2O00308 870 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 GABARAPO95166 117 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 PTHP01270 115 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 MST1P26927 711 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 CDC20Q12834 499 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 SMARCD3Q6STE5 483 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 CD300LDQ6UXZ3 194 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 DEPDC4Q8N2C3 294 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 BBS1Q8NFJ9 593 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 PELOQ9BRX2 385 aaKnown RBP13.72□□□□□ -0.21
MKS1-202ENST00000393119 TMEM27Q9HBJ8 222 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 POLE3Q9NRF9 147 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 CLEC2DQ9UHP7 191 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 EP300Q09472 2414 aaPredicted RBP13.72□□□□□ -0.21
MKS1-202ENST00000393119 ZC3H12DA2A288 527 aaKnown RBP13.72□□□□□ -0.21
MKS1-202ENST00000393119 IL33O95760 270 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 ABCD3P28288 659 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 IFNA8P32881 189 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 EMP2P54851 167 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 IFITM2Q01629 132 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 NDUFA5Q16718 116 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.72□□□□□ -0.21
MKS1-202ENST00000393119 ZNF528Q3MIS6 628 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 POMZP3Q6PJE2 187 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 LRR1Q96L50 414 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 TGIF2Q9GZN2 237 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 TESQ9UGI8 421 aaKnown RBP13.72□□□□□ -0.21
MKS1-202ENST00000393119 POU2F3Q9UKI9 436 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 NOX1Q9Y5S8 564 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 B3GALT1Q9Y5Z6 326 aa13.72□□□□□ -0.21
MKS1-202ENST00000393119 FRG2CA6NGY1 282 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 ZNF99A8MXY4 864 aaPredicted RBP13.71□□□□□ -0.21
MKS1-202ENST00000393119 B4DXG7 233 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 DYRK3O43781 588 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 HPGDP15428 266 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 GRK6P43250 576 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 PCYT1AP49585 367 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 COX10Q12887 443 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 PLA2G2CQ5R387 149 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 BICRALQ6AI39 1079 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.21
MKS1-202ENST00000393119 OR14A16Q8NHC5 309 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 RPL3LQ92901 407 aaKnown RBP13.71□□□□□ -0.21
MKS1-202ENST00000393119 FGF11Q92914 225 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 BPIFA2Q96DR5 249 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 OMA1Q96E52 524 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 OR5M11Q96RB7 305 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 CRB3Q9BUF7 120 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 MED20Q9H944 212 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 FKBP14Q9NWM8 211 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 PMF1-BGLAPU3KQ54 211 aa13.71□□□□□ -0.21
MKS1-202ENST00000393119 RGS13O14921 159 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 SCO2O43819 266 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 CDK1P06493 297 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 BMP4P12644 408 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 CD59P13987 128 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 FPR3P25089 353 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 RNF4P78317 190 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 EFNB1P98172 346 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 CRYZQ08257 329 aaKnown RBP13.71□□□□□ -0.22
MKS1-202ENST00000393119 PLCXD2Q0VAA5 305 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 SYT14P1Q58G82 188 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 FNDC7Q5VTL7 733 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 YOD1Q5VVQ6 348 aaPredicted RBP13.71□□□□□ -0.22
MKS1-202ENST00000393119 HLA-DQA1Q5Y7H0 255 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 PAPD4Q6PIY7 484 aaKnown RBP13.71□□□□□ -0.22
MKS1-202ENST00000393119 ZNF620Q6ZNG0 422 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 RASSF6Q6ZTQ3 369 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 PRSS48Q7RTY5 328 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 SLCO6A1Q86UG4 719 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 STX19Q8N4C7 294 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 AGBL5Q8NDL9 886 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 TEX47Q8TBZ9 253 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 OTULINQ96BN8 352 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 ZNF559Q9BR84 538 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 ULBP3Q9BZM4 244 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 SIAEQ9HAT2 523 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 SLC25A19Q9HC21 320 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 UBQLN4Q9NRR5 601 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 CLN6Q9NWW5 311 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 PCDHGB1Q9Y5G3 927 aa13.71□□□□□ -0.22
MKS1-202ENST00000393119 ZFHX4Q86UP3 3567 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 TMEM200CA6NKL6 621 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 VSTM2BA6NLU5 285 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 M0R082 166 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 SAGP10523 405 aaPredicted RBP13.7□□□□□ -0.22
MKS1-202ENST00000393119 FGF5P12034 268 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 TBXA2RP21731 343 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 RCVRNP35243 200 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 DUSP3P51452 185 aaPredicted RBP13.7□□□□□ -0.22
MKS1-202ENST00000393119 FBXW4P57775 412 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 SPEM2Q0P670 501 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 SF3B4Q15427 424 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■■ 32.5
MKS1-202ENST00000393119 SLC27A4Q6P1M0 643 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 DBX2Q6ZNG2 339 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 MARCH9Q86YJ5 346 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms