RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF300Q96RE9 604 aaPredicted RBP12□□□□□ -0.49
USP44-202ENST00000393091 A0A087WUJ7 227 aa12□□□□□ -0.49
USP44-202ENST00000393091 A0A1W2PRQ8 180 aa12□□□□□ -0.49
USP44-202ENST00000393091 TRAPPC13A5PLN9 417 aa12□□□□□ -0.49
USP44-202ENST00000393091 BCKDKO14874 412 aa12□□□□□ -0.49
USP44-202ENST00000393091 PRKD3O94806 890 aa12□□□□□ -0.49
USP44-202ENST00000393091 LHX2P50458 406 aa12□□□□□ -0.49
USP44-202ENST00000393091 DGCR6Q14129 220 aa12□□□□□ -0.49
USP44-202ENST00000393091 FLOT2Q14254 428 aa12□□□□□ -0.49
USP44-202ENST00000393091 INPP5JQ15735 1006 aaPredicted RBP12□□□□□ -0.49
USP44-202ENST00000393091 ENPP6Q6UWR7 440 aa12□□□□□ -0.49
USP44-202ENST00000393091 FGD2Q7Z6J4 655 aa12□□□□□ -0.49
USP44-202ENST00000393091 GALNT10Q86SR1 603 aa12□□□□□ -0.49
USP44-202ENST00000393091 ADPRHL1Q8NDY3 354 aa12□□□□□ -0.49
USP44-202ENST00000393091 SLC26A7Q8TE54 656 aa12□□□□□ -0.49
USP44-202ENST00000393091 MIB2Q96AX9 1013 aa12□□□□□ -0.49
USP44-202ENST00000393091 KLHDC3Q9BQ90 382 aa12□□□□□ -0.49
USP44-202ENST00000393091 PRSS27Q9BQR3 290 aa12□□□□□ -0.49
USP44-202ENST00000393091 RLIMQ9NVW2 624 aa12□□□□□ -0.49
USP44-202ENST00000393091 PKD1L2Q7Z442 2459 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 FAM47E-STBD1D6RA91 191 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 ADAMDEC1O15204 470 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 IFNW1P05000 195 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 PTGER4P35408 488 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 MAGEA5P43359 124 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 OR1Q1Q15612 314 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 ZFP1Q6P2D0 407 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 ADGRG3Q86Y34 549 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 RNF113BQ8IZP6 322 aaKnown RBP11.99□□□□□ -0.49
USP44-202ENST00000393091 RNF148Q8N7C7 305 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 ZPLD1Q8TCW7 415 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 HS6ST2Q96MM7 605 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 KLHL1Q9NR64 748 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 TRAPPC4Q9Y296 219 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 GNB5O14775 395 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 EFNA2O43921 213 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 PEPDP12955 493 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 GP1BBP13224 206 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 PRG2P13727 222 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 AQP1P29972 269 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 MASP1P48740 699 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 SESN3P58005 492 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 SOWAHCQ53LP3 525 aaPredicted RBP11.99□□□□□ -0.49
USP44-202ENST00000393091 AAGABQ6PD74 315 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 ARSKQ6UWY0 536 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 GGNQ86UU5 652 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 GHDCQ8N2G8 530 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 FAM86B1Q8N7N1 296 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 SNRNP40Q96DI7 357 aaKnown RBP11.99□□□□□ -0.49
USP44-202ENST00000393091 ZNF71Q9NQZ8 489 aaPredicted RBP11.99□□□□□ -0.49
USP44-202ENST00000393091 AGPAT4Q9NRZ5 378 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 MAN2C1Q9NTJ4 1040 aa11.99□□□□□ -0.49
USP44-202ENST00000393091 PAQR5Q9NXK6 330 aaPredicted RBP11.99□□□□□ -0.49
USP44-202ENST00000393091 SPIN1Q9Y657 262 aaPredicted RBP11.99□□□□□ -0.49
USP44-202ENST00000393091 GJE1A6NN92 205 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 FFAR1O14842 300 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 STAMBPO95630 424 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 ZNF682O95780 498 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 CTBP2P56545 445 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 CTU2Q2VPK5 515 aaKnown RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 FAM98BQ52LJ0 330 aaKnown RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 LRRC23Q53EV4 343 aaPredicted RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 ENTPD8Q5MY95 495 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 TSPYL5Q86VY4 417 aaPredicted RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 SMYD1Q8NB12 490 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 OR4C15Q8NGM1 316 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 SLC47A1Q96FL8 570 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 WDR70Q9NW82 654 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 DKKL1Q9UK85 242 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 SHANK1Q9Y566 2161 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 CIB2O75838 187 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 C1QL1O75973 258 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 PMS2P2O95744 297 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 F10P00742 488 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 OPN1SWP03999 348 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 UBTFL6P0CB48 400 aaPredicted RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 GDF1P27539 372 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 CLDN18P56856 261 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 RGS8P57771 180 aaPredicted RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 SMIM11AP58511 58 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 GPR85P60893 370 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 LY6DQ14210 128 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 TOMM34Q15785 309 aaPredicted RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 NDUFAF6Q330K2 333 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 LINC00471Q8N535 108 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 SLC39A7Q92504 469 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 PIP5K1AQ99755 562 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 YY1AP1Q9H869 796 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 TMEM27Q9HBJ8 222 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 HDGFL3Q9Y3E1 203 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 KRT36O76013 467 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 FABP3P05413 133 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 RFX3P48380 749 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 IDH2P48735 452 aaKnown RBP11.98□□□□□ -0.49
USP44-202ENST00000393091 PLGLB1Q02325 96 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 C3orf33Q6P1S2 294 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 VTCN1Q7Z7D3 282 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 NRBF2Q96F24 287 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 LRGUKQ96M69 825 aa11.98□□□□□ -0.49
USP44-202ENST00000393091 BBC3Q96PG8 261 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms