RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 FAM46BQ96A09 425 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 LCORQ96JN0 433 aaPredicted RBP15.43■□□□□ 0.06
SCN3B-202ENST00000392770 MRGPRX3Q96LB0 322 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 NDUFAF4Q9P032 175 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 SIGLEC6O43699 453 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 ARG2P78540 354 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 FAM219BQ5XKK7 198 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 DHRS1Q96LJ7 313 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 NIPSNAP1Q9BPW8 284 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 FOXQ1Q9C009 403 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 SLC25A37Q9NYZ2 338 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 A0A1W2PR48 441 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 KRBA1A5PL33 1030 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 GDF7Q7Z4P5 450 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 FOXRED2Q8IWF2 684 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 ZFPM2Q8WW38 1151 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 MUL1Q969V5 352 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 URM1Q9BTM9 101 aaKnown RBP15.43■□□□□ 0.06
SCN3B-202ENST00000392770 RLIMQ9NVW2 624 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 HCRTR1O43613 425 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 F13BP05160 661 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 CISD3P0C7P0 127 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 POU3F2P20265 443 aaPredicted RBP15.43■□□□□ 0.06
SCN3B-202ENST00000392770 SLC5A2P31639 672 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 HERV-K104P61576 105 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 PHC1P78364 1004 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 AWAT2Q6E213 333 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 GDPGP1Q6ZNW5 385 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 FRMD1Q8N878 549 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 OR7G1Q8NGA0 311 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF431Q8TF32 576 aaPredicted RBP15.43■□□□□ 0.06
SCN3B-202ENST00000392770 ALG14Q96F25 216 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 PLAC1Q9HBJ0 212 aa15.43■□□□□ 0.06
SCN3B-202ENST00000392770 HEMK1Q9Y5R4 338 aaPredicted RBP15.43■□□□□ 0.06
SCN3B-202ENST00000392770 GLULP15104 373 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 GIPRP48546 466 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 FNTBP49356 437 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 PPP5CP53041 499 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 CSNK2A1P68400 391 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TMEM215Q68D42 235 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 SLC25A25Q6KCM7 469 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TMPPEQ6ZT21 453 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 PRICKLE2Q7Z3G6 844 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 CASTOR1Q8WTX7 329 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 CFHR5Q9BXR6 569 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 MED20Q9H944 212 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 SACM1LQ9NTJ5 587 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TBCCD1Q9NVR7 557 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 L7N2F9 121 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TMPRSS11DO60235 418 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TACR3P29371 465 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 SLC19A1P41440 591 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 RGS6P49758 472 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 VAMP2P63027 116 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TBCEQ15813 527 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-202ENST00000392770 CCDC74AQ96AQ1 378 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 PIP5K1CO60331 668 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 POLR2HP52434 150 aaKnown RBP15.42■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF91Q05481 1191 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TBRG1Q3YBR2 411 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 CDNFQ49AH0 187 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 ENTHD1Q8IYW4 607 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 DNAJC22Q8N4W6 341 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 DEFB123Q8N688 67 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 FNDC8Q8TC99 324 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 SGCDQ92629 289 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 LOC105369274A0A096LPK9 316 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 LOC102723532A0A0G2JNH3 316 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TSPAN11A1L157 253 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 GRK5P34947 590 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 OR4N4Q8N0Y3 316 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 SLC16A11Q8NCK7 471 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 CREB3L1Q96BA8 519 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF707Q96C28 371 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-202ENST00000392770 INPP5EQ9NRR6 644 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 DAPP1Q9UN19 280 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 HMGN4O00479 90 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 ETHE1O95571 254 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 CFL1P23528 166 aaKnown RBP15.42■□□□□ 0.06
SCN3B-202ENST00000392770 RIN1Q13671 783 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 PRSS36Q5K4E3 855 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TMEM64Q6YI46 380 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 THAP6Q8TBB0 222 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 SLC46A1Q96NT5 459 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 PRR14Q9BWN1 585 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 SLC25A18Q9H1K4 315 aa15.42■□□□□ 0.06
SCN3B-202ENST00000392770 TEX13CA0A0J9YWL9 993 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 SYT5O00445 386 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 SLC16A7O60669 478 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 NHSL2Q5HYW2 709 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 OPN5Q6U736 354 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 NLRP8Q86W28 1048 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF615Q8N8J6 731 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 ZSCAN4Q8NAM6 433 aaPredicted RBP15.41■□□□□ 0.06
SCN3B-202ENST00000392770 OR6T1Q8NGN1 323 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 NEDD4LQ96PU5 975 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 AK6Q9Y3D8 172 aaKnown RBP15.41■□□□□ 0.06
SCN3B-202ENST00000392770 CD1CP29017 333 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 POU3F4P49335 361 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 BAHD1Q8TBE0 780 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms