RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 FANK1Q8TC84 345 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 C3orf49Q96BT1 292 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 C12orf43Q96C57 262 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR52D1Q9H346 318 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 MED17Q9NVC6 651 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 CARD8Q9Y2G2 431 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 RPL36Q9Y3U8 105 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 TTC28Q96AY4 2481 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 C9J4A7 227 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 OIP5O43482 229 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 RCBTB2O95199 551 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 STSP08842 583 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC6A8P48029 635 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SH3BGRP55822 239 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 FXYD6P3P58550 94 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC26A5P58743 744 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 RAB15P59190 212 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 IRF3Q14653 427 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 DESI1Q6ICB0 168 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 CBLN3Q6UW01 205 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 CCDC81Q6ZN84 652 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 MR1Q95460 341 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 LRR1Q96L50 414 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDCA4Q9BXL8 241 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 ICAM5Q9UMF0 924 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SIGLEC7Q9Y286 467 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 LOC102723996A0A087X1L8 192 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 FAM86C2PA6NEL3 165 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 EFCAB9A8MZ26 197 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 H3BMQ9 156 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMX2-CTNND1H3BSU7 103 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SURF4O15260 269 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 EIF4E2O60573 245 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 TRMUO75648 421 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 HMGN1P05114 100 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 DBTP11182 482 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 E2F1Q01094 437 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF91Q05481 1191 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 PLAG1Q6DJT9 500 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 CYP4Z2PQ8N1L4 340 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC43A2Q8N370 569 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR52L1Q8NGH7 329 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 C9orf43Q8TAL5 461 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 RAB2BQ8WUD1 216 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SAMD8Q96LT4 415 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 COG8Q96MW5 612 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF582Q96NG8 517 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC19A3Q9BZV2 496 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 STRADBQ9C0K7 418 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 HHATLQ9HCP6 504 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 LOXL2Q9Y4K0 774 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 NPFFR2Q9Y5X5 522 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 WDFY3Q8IZQ1 3526 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 GPR179Q6PRD1 2367 aa10.48□□□□□ -0.73
SMARCAL1-203ENST00000392128 TRBV11-1A0A0K0K1C0 115 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 HTR3EA5X5Y0 456 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 TRIM64BA6NI03 449 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 FADS1O60427 444 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 HCN1O60741 890 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 NOL3O60936 208 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 PTP4A3O75365 173 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 PPM1BO75688 479 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 IGF2P01344 180 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 SAGP10523 405 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 PNMTP11086 282 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 BMP7P18075 431 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 EVI2BP34910 448 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF117Q03924 483 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 EFR3AQ14156 821 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 NCF4Q15080 339 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 DCAF12Q5T6F0 453 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 FAM199XQ6PEV8 388 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ERI1Q8IV48 349 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMCO5AQ8N6Q1 288 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 AMER2Q8N7J2 671 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR5L2Q8NGL0 311 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 C8orf44Q96CB5 159 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 EDEM2Q9BV94 578 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 FUNDC2Q9BWH2 189 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 TBL1XR1Q9BZK7 514 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 RTN4RQ9BZR6 473 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 NAA50Q9GZZ1 169 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 UBQLN3Q9H347 655 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 C12orf10Q9HB07 376 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMEM9BQ9NQ34 198 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 WARS2Q9UGM6 360 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMEM200CA6NKL6 621 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 SNTNA6NMZ2 147 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ENO4A6NNW6 628 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 KDM4EB2RXH2 506 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 BHLHE40O14503 412 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 PRODHO43272 600 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 NDUFB5O43674 189 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 LCKP06239 509 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 NAGAP17050 411 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 FUT1P19526 365 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 PCSK6P29122 969 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 GRK5P34947 590 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms