RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 KPNA2P52292 529 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 SRP54P61011 504 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 SMARCB1Q12824 385 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 IRF4Q15306 451 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC57Q2TAC2 916 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 COX19Q49B96 90 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 LY6G6FQ5SQ64 297 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 PRR9Q5T870 116 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 Q5W150 140 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ETFRF1Q6IPR1 90 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC137Q6PK04 289 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TMIGD1Q6UXZ0 262 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 WASH2PQ6VEQ5 465 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM184AQ6ZMB5 413 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ACP7Q6ZNF0 438 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 LPCAT2Q7L5N7 544 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 APTXQ7Z2E3 356 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 MIER3Q7Z3K6 550 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF571Q7Z3V5 609 aaPredicted RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TAF8Q7Z7C8 310 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF709Q8N972 641 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 OR10G2Q8NGC3 310 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 FANK1Q8TC84 345 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM158Q8WZ71 300 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 NDRG1Q92597 394 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ATP6V1E2Q96A05 226 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 PGLYRP4Q96LB8 373 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC43Q96MW1 224 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF641Q96N77 438 aaPredicted RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 RNF157Q96PX1 679 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 MCHR1Q99705 422 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 NPAS2Q99743 824 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 GAL3ST1Q99999 423 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ECSITQ9BQ95 431 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 OSBPL11Q9BXB4 747 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 OR11A1Q9GZK7 315 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 NAT10Q9H0A0 1025 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC25A51Q9H1U9 297 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TM9SF3Q9HD45 589 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 NGBQ9NPG2 151 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ARGLU1Q9NWB6 273 aaPredicted RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TERF2IPQ9NYB0 399 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 MRPL39Q9NYK5 338 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 RBAKQ9NYW8 714 aaPredicted RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 DEC1Q9P2X7 70 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TRIM10Q9UDY6 481 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 RIMS3Q9UJD0 308 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 GNPTGQ9UJJ9 305 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 KIF26AQ9ULI4 1882 aaPredicted RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TRAF3IP3Q9Y228 551 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 RNF6Q9Y252 685 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 TDRKHQ9Y2W6 561 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 UBIAD1Q9Y5Z9 338 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 RFNGQ9Y644 331 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC7Q96M83 1385 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 PLA2R1Q13018 1463 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RAD54L2Q9Y4B4 1467 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SCN2AQ99250 2005 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ZMYM6O95789 1325 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM89A2RUT3 159 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF705EA8MWA4 302 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 H0YL77 283 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ANGPTL7O43827 346 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SSX5O60225 188 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 PNPP00491 289 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RETP07949 1114 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 PPIAL4GP0DN37 164 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ALPPL2P10696 532 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 MUC1P15941 1255 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ABOP16442 354 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 PSMC3P17980 439 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 TCN2P20062 427 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 PAICSP22234 425 aaKnown RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 CTNNA1P35221 906 aaKnown RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 GLP1RP43220 463 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 GPC3P51654 580 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ATXN3P54252 364 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 NAPAP54920 295 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ENPEPQ07075 957 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RIPPLY1Q0D2K3 151 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 MADCAM1Q13477 382 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RIPK1Q13546 671 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 MOBPQ13875 183 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ZSWIM7Q19AV6 140 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM83EQ2M2I3 478 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF674Q2M3X9 581 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RFX4Q33E94 735 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 C2orf76Q3KRA6 126 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ADPRMQ3LIE5 342 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC40Q4G0X9 1142 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC39A12Q504Y0 691 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 LRRC10Q5BKY1 277 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 FBXW9Q5XUX1 488 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ATL3Q6DD88 541 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 FRMPD2BQ6IN97 320 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 C11orf71Q6IPW1 123 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 FAHD2BQ6P2I3 314 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC39A4Q6P5W5 647 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms