RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 NSMCE4AQ9NXX6 385 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 SLC2A8Q9NY64 477 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 BCCIPQ9P287 314 aaKnown RBP eCLIP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 PLA2G4CQ9UP65 541 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 HEBP2Q9Y5Z4 205 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 TMEM223A0PJW6 202 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 SDHAF1A6NFY7 115 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 ZNF98A6NK75 572 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 E7EQL1 145 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 RAD51DO75771 328 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 HRES1P13985 223 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 OMGP23515 440 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 EPHX2P34913 555 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 RFC2P35250 354 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 PRRX1P54821 245 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 RBX1P62877 108 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 SLC39A12Q504Y0 691 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 CYBRD1Q53TN4 286 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 KRT80Q6KB66 452 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 CD164L2Q6UWJ8 174 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 FANK1Q8TC84 345 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 TSPAN18Q96SJ8 248 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 NLNQ9BYT8 704 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 ZFP14Q9HCL3 533 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 TREM2Q9NZC2 230 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 APPL1Q9UKG1 709 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 GPR34Q9UPC5 381 aa-0.59□□□□□ -2.5
SNORA40-201ENST00000388090 IGKV2-29A2NJV5 120 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 XKRYO14609 159 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 ST8SIA3O43173 380 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 TPST2O60704 377 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 ATP9AO75110 1047 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 KLHL2O95198 593 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 SLC16A8O95907 504 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 LALBAP00709 142 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 FCARP24071 287 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 STIP1P31948 543 aaKnown RBP-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 CTNNA1P35221 906 aaKnown RBP-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 SLC11A1P49279 550 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 STARD6P59095 220 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 LOXL1Q08397 574 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 SLC10A7Q0GE19 358 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 RFX4Q33E94 735 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 DEFB134Q4QY38 66 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 LRRC10Q5BKY1 277 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 GPR139Q6DWJ6 353 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 CASC4Q6P4E1 433 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 NRMQ8IXM6 262 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 OR6C4Q8NGE1 309 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 HGDQ93099 445 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 CREB3L1Q96BA8 519 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 TM4SF19Q96DZ7 209 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 FCRL1Q96LA6 429 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 PGLYRP4Q96LB8 373 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 KLHDC3Q9BQ90 382 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 DDX47Q9H0S4 455 aaKnown RBP-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 FAM124BQ9H5Z6 455 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 ZNF442Q9H7R0 627 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 C12orf10Q9HB07 376 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 SMPD3Q9NY59 655 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 C5AR2Q9P296 337 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 FSIP2Q5CZC0 6907 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 TRIP11Q15643 1979 aa-0.6□□□□□ -2.51
SNORA40-201ENST00000388090 ITIH6Q6UXX5 1313 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 HTR3EA5X5Y0 456 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 RAD51BO15315 384 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 AHCYL1O43865 530 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 TRIM3O75382 744 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 RLN1P04808 185 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 SLC26A3P40879 764 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 OPRD1P41143 372 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 SELENOTP62341 195 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 HERV-K104P63124 156 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 CCDC173Q0VFZ6 552 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 AIMP1Q12904 312 aaKnown RBP-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 CAMK2DQ13557 499 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 KRBOX4Q5JUW0 171 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 VAX1Q5SQQ9 334 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 SLX4IPQ5VYV7 408 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 DPY19L2P2Q6ZN68 376 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 C4orf50Q6ZRC1 276 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 USP50Q70EL3 339 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 PRPF39Q86UA1 669 aaKnown RBP-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 UBLCP1Q8WVY7 318 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 DNASE1L2Q92874 299 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 TMEM121Q9BTD3 319 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 CHAC1Q9BUX1 264 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 PPDPFQ9H3Y8 114 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 CLMPQ9H6B4 373 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 CHCHD3Q9NX63 227 aaKnown RBP-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 ERVK-18Q9QC07 812 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 PCYOX1Q9UHG3 505 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 CCDC88CQ9P219 2028 aa-0.61□□□□□ -2.51
SNORA40-201ENST00000388090 INS-IGF2F8WCM5 200 aa-0.62□□□□□ -2.51
SNORA40-201ENST00000388090 H3BMH7 237 aa-0.62□□□□□ -2.51
SNORA40-201ENST00000388090 GGPS1O95749 300 aa-0.62□□□□□ -2.51
SNORA40-201ENST00000388090 IGHV1-8P0DP01 117 aa-0.62□□□□□ -2.51
SNORA40-201ENST00000388090 NMT1P30419 496 aaKnown RBP-0.62□□□□□ -2.51
SNORA40-201ENST00000388090 NPY2RP49146 381 aa-0.62□□□□□ -2.51
SNORA40-201ENST00000388090 CX3CR1P49238 355 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms