RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ZSCAN25Q6NSZ9 544 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 CCDC137Q6PK04 289 aaKnown RBP4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 FRA10AC1Q70Z53 315 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 EFL1Q7Z2Z2 1120 aaKnown RBP4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 ZBED8Q8IZ13 594 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 BHLHE23Q8NDY6 225 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR13F1Q8NGS4 319 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR2A12Q8NGT7 310 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 PIGCQ92535 297 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 FAF2Q96CS3 445 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 PSKH2Q96QS6 385 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 MCHR1Q99705 422 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 DEFB126Q9BYW3 111 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 RHBGQ9H310 441 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 LRRN3Q9H3W5 708 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 GLIPR2Q9H4G4 154 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 FANCFQ9NPI8 374 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 WARS2Q9UGM6 360 aaKnown RBP4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 SCML2Q9UQR0 700 aa4.08□□□□□ -1.76
RNU6-40P-201ENST00000384254 K7ENP7 123 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 KIF2AO00139 706 aaPredicted RBP4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 TNFSF11O14788 317 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 LATO43561 262 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 IL1BP01584 269 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 ZP3P21754 424 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 FASP25445 335 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 RPL13AP40429 203 aaKnown RBP4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 KIR2DS2P43631 304 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 MEOX2P50222 304 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 UBE2HP62256 183 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 DPYSL2Q16555 572 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 MAJINQ3KP22 176 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 SLC25A52Q3SY17 297 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 FILIP1LQ4L180 1135 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 PAMR1Q6UXH9 720 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 TFAP2EQ6VUC0 442 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 UTS2BQ765I0 119 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 ARCQ7LC44 396 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 CCDC65Q8IXS2 484 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 CNPY4Q8N129 248 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 GPR137CQ8N3F9 429 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR4D9Q8NGE8 314 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 RAPGEF5Q92565 580 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 N4BP2L2Q92802 583 aaPredicted RBP4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 BADQ92934 168 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 SLC41A3Q96GZ6 507 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 COQ2Q96H96 371 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 SECISBP2Q96T21 854 aaKnown RBP4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 NIPSNAP3BQ9BS92 247 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 CNPY3Q9BT09 278 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 C19orf24Q9BVV8 132 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 GCOM2Q9BZD3 368 aaPredicted RBP4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 RPS10P5Q9NQ39 176 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 PHF11Q9UIL8 331 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 HPCAL4Q9UM19 191 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 COPS3Q9UNS2 423 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 VSIG4Q9Y279 399 aa4.07□□□□□ -1.76
RNU6-40P-201ENST00000384254 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 HIP1O00291 1037 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 CXCL11O14625 94 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR10H3O60404 316 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 SERF1AO75920 110 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 IGHDP01880 384 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 MMP11P24347 488 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 GCAP28676 217 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 RDXP35241 583 aaKnown RBP4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 LEPP41159 167 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR3A4PP47883 348 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 STARP49675 285 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 DAP3P51398 398 aaKnown RBP4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 EFNB2P52799 333 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 KRTAP10-9P60411 292 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 PRR4Q16378 134 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR2B11Q5JQS5 317 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 UTF1Q5T230 341 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 SKA3Q8IX90 412 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR9A1PQ8NGU1 263 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 EFHD2Q96C19 240 aaPredicted RBP4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 VSIG2Q96IQ7 327 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 NOL4LQ96MY1 436 aaPredicted RBP4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 IL4I1Q96RQ9 567 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 CHIAQ9BZP6 476 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 SMOXQ9NWM0 555 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 SIGLEC8Q9NYZ4 499 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 TIMM10BQ9Y5J6 103 aa4.06□□□□□ -1.76
RNU6-40P-201ENST00000384254 KANK1Q14678 1352 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 CLSPNQ9HAW4 1339 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 CXCL13O43927 109 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 ECI2O75521 394 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 LYPLA1O75608 230 aaPredicted RBP4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 SURF6O75683 361 aaKnown RBP4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 PALMO75781 387 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 SLITRK3O94933 977 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 AP2A1O95782 977 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 POU2F1P14859 743 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 HMGB2P26583 209 aaKnown RBP4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 TAF6P49848 677 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 RPS8P62241 208 aaKnown RBP4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 KIAA0040Q15053 153 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 AANATQ16613 207 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms