RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 OR52B6Q8NGF0 335 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A3Q8NHU0 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 ADAM19Q9H013 955 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 FZD8Q9H461 694 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 NOCTQ9UK39 431 aaKnown RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 SIT1Q9Y3P8 196 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 SSTR2P30874 369 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CNR2P34972 360 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 POU4F2Q12837 409 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 PCLAFQ15004 111 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 Q1RN00 199 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 MEDAGQ5VYS4 303 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 GLIS1Q8NBF1 620 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 HIDE1A8MVS5 230 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 MED6O75586 246 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 FOXC1Q12948 553 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 TRAM1Q15629 374 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 NDUFAF7Q7L592 441 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 KIAA1958Q8N8K9 716 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 C2CD4AQ8NCU7 369 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 OR5D14Q8NGL3 314 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 LINC01599Q8WXQ3 324 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 UHRF2Q96PU4 802 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 PEBP4Q96S96 227 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CMSS1Q9BQ75 279 aaKnown RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 MARCH4Q9P2E8 410 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 C17orf113A0A1B0GUU1 675 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 RPS10-NUDT3A0A1W2PQS6 291 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 MYADML2A6NDP7 307 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 SCRG1O75711 98 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 RPS10P46783 165 aaKnown RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 TUBA1BP68363 451 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 TUBA4AP68366 448 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 TUBA3CQ13748 450 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 EPGNQ6UW88 154 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 TUBA1AQ71U36 451 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 ZDHHC14Q8IZN3 488 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 NICN1Q9BSH3 213 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CLCF1Q9UBD9 225 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 ACPPP15309 386 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 DESI1Q6ICB0 168 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 WFDC8Q8IUA0 241 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CPOQ8IVL8 374 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 WDR31Q8NA23 367 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 ELMOD3Q96FG2 381 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 MGLLQ99685 303 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CD320Q9NPF0 282 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 A0A1W2PPH5 198 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 EIF2DP41214 584 aaKnown RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 FLI1Q01543 452 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 TCTE1Q5JU00 501 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 GOT1L1Q8NHS2 421 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 MIB2Q96AX9 1013 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 UNKLQ9H9P5 680 aaKnown RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 SALL3Q9BXA9 1300 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 TRGV8A0A0C4DH27 118 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 A0A1W2PQL4 384 aaPredicted RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 APBB3O95704 486 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 PITX1P78337 314 aaPredicted RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 C6orf136Q5SQH8 315 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 OR8G2PQ6IF36 304 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 SBSNQ6UWP8 590 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 IGDCC3Q8IVU1 814 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 PCNPQ8WW12 178 aaKnown RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 RAB7BQ96AH8 199 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 NOX3Q9HBY0 568 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 UNGP13051 313 aaPredicted RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 UGT2B7P16662 529 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 OR4D1Q15615 310 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 SLC6A17Q9H1V8 727 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 BOKQ9UMX3 212 aaPredicted RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 ABCA6Q8N139 1617 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 KLF11O14901 512 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 ARPC1BO15143 372 aaKnown RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 GM2AP17900 193 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 TM4SF1P30408 202 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 MTCP1P56278 107 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 UPP1Q16831 310 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 ADPRMQ3LIE5 342 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 RPL13AP3Q6NVV1 102 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 VGLL2Q8N8G2 317 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 C4orf36Q96KX1 117 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 MED20Q9H944 212 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 P4HTMQ9NXG6 502 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 SOX15O60248 233 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 KCNE1P15382 129 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 HSF5Q4G112 596 aaPredicted RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 RNF128Q8TEB7 428 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 HLA-CQ95604 372 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 HRASLS5Q96KN8 279 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 CCDC32Q9BV29 185 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 NMNAT1Q9HAN9 279 aaPredicted RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 BCORL1Q5H9F3 1711 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 CRABP1P29762 137 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms