RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 A0A1B0GX12 115 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 CBR3O75828 277 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 PDGFAP04085 211 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 THY1P04216 161 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 PTNP21246 168 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 SLC1A3P43003 542 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 MEOX1P50221 254 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 PLGLB1Q02325 96 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 TRAM2Q15035 370 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 EXOC3L2Q2M3D2 409 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 ULK3Q6PHR2 472 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 LSRQ86X29 649 aaPredicted RBP11.77□□□□□ -0.52
CBWD3-203ENST00000377344 FADS6Q8N9I5 356 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 PIK3C3Q8NEB9 887 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 TMEM234Q8WY98 164 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 EME1Q96AY2 570 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF524Q96C55 264 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 SCMH1Q96GD3 660 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 ALPK1Q96QP1 1244 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 CIB1Q99828 191 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 ZFP64Q9NPA5 681 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 MED17Q9NVC6 651 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 TMCC3Q9ULS5 477 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 OAZ3Q9UMX2 235 aa11.77□□□□□ -0.52
CBWD3-203ENST00000377344 TNRC6AQ8NDV7 1962 aaKnown RBP11.77□□□□□ -0.53
CBWD3-203ENST00000377344 ANKRD11Q6UB99 2663 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-203ENST00000377344 HEATR5AQ86XA9 2040 aa11.77□□□□□ -0.53
CBWD3-203ENST00000377344 K7EM74 188 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 FAAHO00519 579 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 CCNA2P20248 432 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 MST1P26927 711 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 DPP4P27487 766 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 GDF1P27539 372 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 TACR3P29371 465 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 DNAJA1P31689 397 aaKnown RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 DCST1Q5T197 706 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 LPCAT4Q643R3 524 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 IGFL3Q6UXB1 125 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 TMEM179BQ7Z7N9 219 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 NKAIN4Q8IVV8 208 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 SLC38A4Q969I6 547 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 C3orf49Q96BT1 292 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 SDCCAG3Q96C92 435 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 NTNG2Q96CW9 530 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 C1GALT1C1Q96EU7 318 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 EPYCQ99645 322 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 MFRPQ9BY79 579 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 MAN2C1Q9NTJ4 1040 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 STOML1Q9UBI4 398 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 RPH3AQ9Y2J0 694 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 TRBV4-1A0A0J9YWV2 114 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 LRRC3CA6NJW4 275 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 ELOA3DA6NLF2 546 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 SHISA8B8ZZ34 492 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 G3V2T6 193 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 CHP2O43745 196 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 DPM1O60762 260 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 TRAPPC6AO75865 159 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 NTN1O95631 604 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 RFPL3SP0C7P2 107 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 FAM87AP0C7U9 286 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 PRKCAP17252 672 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 FPR1P21462 350 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 DSCR4P56555 118 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 FOXO1Q12778 655 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 MERTKQ12866 999 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 DGCR6Q14129 220 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 SNCBQ16143 134 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 ELOA3BQ3SY89 546 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 OTUD3Q5T2D3 398 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 CNTRLQ7Z7A1 2325 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 STK32CQ86UX6 486 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 ZDHHC13Q8IUH4 622 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 HS3ST5Q8IZT8 346 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 ELOA3Q8NG57 546 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 OR5K1Q8NHB7 308 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 SLC7A13Q8TCU3 470 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 TMEM255BQ8WV15 326 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 ST8SIA1Q92185 356 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 PDP1Q9P0J1 537 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 B4GALT7Q9UBV7 327 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 TP53TG5Q9Y2B4 290 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 C15orf41Q9Y2V0 281 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 PCDHGB7Q9Y5F8 929 aa11.76□□□□□ -0.53
CBWD3-203ENST00000377344 MAGED1Q9Y5V3 778 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-203ENST00000377344 FAM166BA8MTA8 275 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 PDLIM1O00151 329 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 CCNB2O95067 398 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 THRBP10828 461 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 HK1P19367 917 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 PRKACGP22612 351 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 CXCR1P25024 350 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 PEX2P28328 305 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 FOXF1Q12946 379 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms