RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PRSS41Q7RTY9 318 aa23.4■■□□□ 1.34
C9orf40-201ENST00000376854 TMEM52Q8NDY8 209 aa23.4■■□□□ 1.34
C9orf40-201ENST00000376854 ABCG5Q9H222 651 aa23.4■■□□□ 1.34
C9orf40-201ENST00000376854 LYRM4Q9HD34 91 aa23.4■■□□□ 1.34
C9orf40-201ENST00000376854 H0Y8X5 98 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 SMLR1H3BR10 107 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 EVI2BP34910 448 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 ACVR1BP36896 505 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 OR12D2P58182 307 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 BICRALQ6AI39 1079 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 GPR135Q8IZ08 494 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 SMPDL3BQ92485 455 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 NECTIN4Q96NY8 510 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 FOLH1BQ9HBA9 442 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 TMEM27Q9HBJ8 222 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 KLHL1Q9NR64 748 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 FBXL4Q9UKA2 621 aa23.39■■□□□ 1.34
C9orf40-201ENST00000376854 RFPL3O75679 317 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 PPP1R3DO95685 299 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 ZNF3P17036 446 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 COL9A1P20849 921 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 SLC2A5P22732 501 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 GABRA3P34903 492 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 KIAA1024LP59773 190 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 TRMT10AQ8TBZ6 339 aaKnown RBP23.39■■□□□ 1.33
C9orf40-201ENST00000376854 GTPBP2Q9BX10 602 aaKnown RBP23.39■■□□□ 1.33
C9orf40-201ENST00000376854 USP36Q9P275 1121 aaKnown RBP23.39■■□□□ 1.33
C9orf40-201ENST00000376854 PILRAQ9UKJ1 303 aa23.39■■□□□ 1.33
C9orf40-201ENST00000376854 A0A0G2JK05 382 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 GXYLT2A0PJZ3 443 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 EEF1E1O43324 174 aaKnown RBP23.38■■□□□ 1.33
C9orf40-201ENST00000376854 PTP4A3O75365 173 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 PLAURQ03405 335 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 MRPL28Q13084 256 aaKnown RBP23.38■■□□□ 1.33
C9orf40-201ENST00000376854 PLA1AQ53H76 456 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 PXKQ7Z7A4 578 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 DNAJC5GQ8N7S2 189 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 DEDD2Q8WXF8 326 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 TRAF4Q9BUZ4 470 aaPredicted RBP23.38■■□□□ 1.33
C9orf40-201ENST00000376854 ERVMER34-1Q9H9K5 563 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 DZANK1Q9NVP4 752 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 MAT2BQ9NZL9 334 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 OR6C74A6NCV1 312 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 SLC9B1P1A6NJY1 282 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 BRINP1O60477 761 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 GYPBP06028 91 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 BTG1P62324 171 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 POU6F2P78424 691 aaPredicted RBP23.38■■□□□ 1.33
C9orf40-201ENST00000376854 PRICKLE4Q2TBC4 344 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 BTBD16Q32M84 506 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 ZNF613Q6PF04 617 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 SLC44A3Q8N4M1 653 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 PGLYRP3Q96LB9 341 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 ZNF559Q9BR84 538 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 TMEM168Q9H0V1 697 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 CD93Q9NPY3 652 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 C14orf105Q9NVL8 296 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 ACTR10Q9NZ32 417 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 PCOLCE2Q9UKZ9 415 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 SPACA6W5XKT8 324 aa23.38■■□□□ 1.33
C9orf40-201ENST00000376854 SC5DO75845 299 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 AK1P00568 194 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 AHCYP23526 432 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 NFATC4Q14934 902 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 SLC25A35Q3KQZ1 300 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 ZCCHC12Q6PEW1 402 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 CADM2Q8N3J6 435 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 OR5T3Q8NGG3 340 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 OR5J2Q8NH18 312 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 RERGQ96A58 199 aaPredicted RBP23.37■■□□□ 1.33
C9orf40-201ENST00000376854 ABHD1Q96SE0 405 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 ZFYVE21Q9BQ24 234 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 EYSQ5T1H1 3165 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 H0YGG7 62 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 AKR7A2O43488 359 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 GPR75O95800 540 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 CT62P0C5K7 136 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 HK1P19367 917 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 PYCR1P32322 319 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 ARF3P61204 181 aaPredicted RBP23.37■■□□□ 1.33
C9orf40-201ENST00000376854 ACSM3Q53FZ2 586 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 ZAR1Q86SH2 424 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 FBXL21Q9UKT6 434 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 CACNG2Q9Y698 323 aa23.37■■□□□ 1.33
C9orf40-201ENST00000376854 RASGRP1O95267 797 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 HOXC4P09017 264 aaPredicted RBP23.36■■□□□ 1.33
C9orf40-201ENST00000376854 NTSR1P30989 418 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 TNFRSF4P43489 277 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 LBX1P52954 281 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 DMKNQ6E0U4 476 aaPredicted RBP23.36■■□□□ 1.33
C9orf40-201ENST00000376854 FAAH2Q6GMR7 532 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 KRT74Q7RTS7 529 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 ZNF614Q8N883 585 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 CNOT9Q92600 299 aaKnown RBP23.36■■□□□ 1.33
C9orf40-201ENST00000376854 PEX11GQ96HA9 241 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 WDR92Q96MX6 357 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 TNFRSF13CQ96RJ3 184 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 IL21RQ9HBE5 538 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 CAPN10Q9HC96 672 aa23.36■■□□□ 1.33
C9orf40-201ENST00000376854 NCKAP1Q9Y2A7 1128 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms