RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 VEZF1Q14119 521 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 PDK3Q15120 406 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 GPR68Q15743 365 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 TAB1Q15750 504 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 PGS1Q32NB8 556 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 ARHGAP11BQ3KRB8 267 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 ZNF672Q499Z4 452 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 TIGD2Q4W5G0 525 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 TIMM23BQ5SRD1 257 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 PDZK1Q5T2W1 519 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 C1QTNF12Q5T7M4 302 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 ZCCHC23Q6ZST2 131 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 NUFIP2Q7Z417 695 aaKnown RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 C6orf120Q7Z4R8 191 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 NUDCD3Q8IVD9 361 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 ZNF100Q8IYN0 542 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 KRTCAP2Q8N6L1 136 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 OR8J2Q8NGG1 315 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 OR5AK3PQ8NH89 298 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 PIWIL2Q8TC59 973 aaKnown RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 MIPOL1Q8TD10 442 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 SMAP2Q8WU79 429 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 PSD2Q9BQI7 771 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 GRIP2Q9C0E4 1043 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 ZNF350Q9GZX5 532 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 ZDHHC2Q9UIJ5 367 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 MGAT4BQ9UQ53 548 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 SULT2B1O00204 365 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 DNAJA2O60884 412 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 CYP7B1O75881 506 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 PLAUP00749 431 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 GGT1P19440 569 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 LRRC74AQ0VAA2 488 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 MERTKQ12866 999 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 SKP2Q13309 424 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 PPA1Q15181 289 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 NRF1Q16656 503 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 CLEC12BQ2HXU8 276 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 SYT14P1Q58G82 188 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 TMPPEQ6ZT21 453 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 OR5D16Q8NGK9 328 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 OR4A15Q8NGL6 344 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 ZNF563Q8TA94 476 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 PIGXQ8TBF5 258 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 C3orf30Q96M34 536 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 THUMPD3Q9BV44 507 aaKnown RBP13.09□□□□□ -0.31
HDAC6-204ENST00000376643 DPY30Q9C005 99 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 ACER3Q9NUN7 267 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 GIMAP2Q9UG22 337 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-204ENST00000376643 HDGFL3Q9Y3E1 203 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
HDAC6-204ENST00000376643 PRSS51A0A1B0GVH4 220 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 A0A1W2PNR3 127 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 OVOL3O00110 214 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 BIRC5O15392 142 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 EFNA2O43921 213 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 SERPINE1P05121 402 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 UQCRBP14927 111 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 COX5AP20674 150 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 UQCRC2P22695 453 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 HTR3AP46098 478 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 DIO1P49895 249 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 KHKP50053 298 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 MAP2K6P52564 334 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 SESN3P58005 492 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 DMTNQ08495 405 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 GNA13Q14344 377 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 TOMM34Q15785 309 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-204ENST00000376643 STK11Q15831 433 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 KLHL17Q6TDP4 642 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 GRINAQ7Z429 371 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
HDAC6-204ENST00000376643 DEPDC4Q8N2C3 294 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 TRIML2Q8N7C3 387 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 LRRN4CLQ8ND94 238 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 OR2W6PQ8NHA6 318 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 RAB3IL1Q8TBN0 382 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 TESCQ96BS2 214 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 ANKZF1Q9H8Y5 726 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
HDAC6-204ENST00000376643 KCNE3Q9Y6H6 103 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 ROS1P08922 2347 aa13.08□□□□□ -0.32
HDAC6-204ENST00000376643 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF814B7Z6K7 855 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 SMAD9O15198 467 aaKnown RBP13.07□□□□□ -0.32
HDAC6-204ENST00000376643 TM9SF1O15321 606 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 OIP5O43482 229 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 KIAA0513O60268 411 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 UGT2B17O75795 530 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 PMS2P2O95744 297 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 DANCRP0C864 163 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 UBTFL6P0CB48 400 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-204ENST00000376643 TFPIP10646 304 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 BSPH1Q075Z2 132 aa13.07□□□□□ -0.32
HDAC6-204ENST00000376643 NDUFAF6Q330K2 333 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms