RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	PRTG	Q2VWP7	1150 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	TRIL	Q7L0X0	811 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	ASCL5	Q7RTU5	278 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	ZNF100	Q8IYN0	542 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	NXPE2	Q96DL1	559 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	TSSK2	Q96PF2	358 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	IER2	Q9BTL4	223 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	WWTR1	Q9GZV5	400 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	ZNF768	Q9H5H4	540 aa	Known RBP	12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	PARD6A	Q9NPB6	346 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	UPB1	Q9UBR1	384 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	PILRA	Q9UKJ1	303 aa		12.45	□□□□□ -0.42
DDR1-225	ENST00000376568	ACVR1B	P36896	505 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	CRISP1	P54107	249 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	SLC26A5	P58743	744 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TOMM34	Q15785	309 aa	Predicted RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	LRFN4	Q6PJG9	635 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	FAM220A	Q7Z4H9	259 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TMEM179B	Q7Z7N9	219 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	ZNF671	Q8TAW3	534 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	RNFT2	Q96EX2	444 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568		Q96MT0	163 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TMED9	Q9BVK6	235 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TAS2R16	Q9NYV7	291 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	SCN8A	Q9UQD0	1980 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	MAGEB4	O15481	346 aa	Predicted RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	REN	P00797	406 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	IGLV3-19	P01714	112 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	PABPC4L	P0CB38	370 aa	Known RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	CD46	P15529	392 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TMED1	Q13445	227 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	SAXO2	Q658L1	398 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	PRICKLE2	Q7Z3G6	844 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	ANKRD37	Q7Z713	158 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	SLC30A8	Q8IWU4	369 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	RDH12	Q96NR8	316 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	SECISBP2	Q96T21	854 aa	Known RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	MALT1	Q9UDY8	824 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	GNG8	Q9UK08	70 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	NXT1	Q9UKK6	140 aa	Known RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	FAM25A	B3EWG3	89 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	FAM25C	B3EWG5	89 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	FAM25G	B3EWG6	89 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TLX3	O43711	291 aa	Predicted RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	MFN2	O95140	757 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TFPT	P0C1Z6	253 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	ZNF3	P17036	446 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TRHR	P34981	398 aa	Predicted RBP	12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	CTBP2	P56545	445 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	C1QL3	Q5VWW1	255 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	GCNT2	Q8N0V5	402 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	TM9SF2	Q99805	663 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	PINK1	Q9BXM7	581 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	SEMA4C	Q9C0C4	833 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	VNN3	Q9NY84	501 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568	ERVK-18	Q9QC07	812 aa		12.44	□□□□□ -0.42
DDR1-225	ENST00000376568		A0A1W2PRG6	482 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	TBX1	O43435	398 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	SUSD5	O60279	629 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	SYNGR4	O95473	234 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	PRKCA	P17252	672 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	PSMA3	P25788	255 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	CLRN1	P58418	232 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	CXADR	P78310	365 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	INSM1	Q01101	510 aa	Predicted RBP	12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	PMP22	Q01453	160 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	ST3GAL4	Q11206	333 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	PTGES3	Q15185	160 aa	Known RBP	12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	PRICKLE4	Q2TBC4	344 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	ALG10	Q5BKT4	473 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	LRIF1	Q5T3J3	769 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	GTF2IRD2B	Q6EKJ0	949 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	MSANTD1	Q6ZTZ1	278 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	SLC35D2	Q76EJ3	337 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	GTF2IRD2	Q86UP8	949 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	KMT5C	Q86Y97	462 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	CCDC103	Q8IW40	242 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	LRRC18	Q8N456	261 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	OR2T33	Q8NG76	320 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	RBP7	Q96R05	134 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	TIMMDC1	Q9NPL8	285 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	PRAMEF25	A6NGN4	478 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	FOXD2	O60548	495 aa	Predicted RBP	12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	HMBOX1	Q6NT76	420 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	MDGA2	Q7Z553	956 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	BEST3	Q8N1M1	668 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	ZBTB44	Q8NCP5	570 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	MOSPD2	Q8NHP6	518 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	SLC41A2	Q96JW4	573 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	KATNB1	Q9BVA0	655 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	NPL	Q9BXD5	320 aa	Predicted RBP	12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	OR52D1	Q9H346	318 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	GPATCH2	Q9NW75	528 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	FAM118A	Q9NWS6	357 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	FRYL	O94915	3013 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	TCRBV3S1	A0A5B6	114 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	ACOT7	O00154	380 aa		12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	OXSR1	O95747	527 aa	Predicted RBP	12.43	□□□□□ -0.42
DDR1-225	ENST00000376568	AK1	P00568	194 aa		12.43	□□□□□ -0.42

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