RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 LHX2P50458 406 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF136P52737 540 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 SESN3P58005 492 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 COPZ1P61923 177 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 RAC1P63000 192 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 SELENOWP63302 87 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 FOXF1Q12946 379 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 BNIP2Q12982 314 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 MRPL49Q13405 166 aaKnown RBP10.27□□□□□ -0.77
HSPG2-202ENST00000374676 NRF1Q16656 503 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 GXYLT1Q4G148 440 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 WLSQ5T9L3 541 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 RAET1LQ5VY80 246 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 WBP2NLQ6ICG8 309 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 CBLL1Q75N03 491 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 GRINAQ7Z429 371 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 COMTD1Q86VU5 262 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 OR52E4Q8NGH9 312 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF563Q8TA94 476 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 RNF145Q96MT1 663 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 NPAS1Q99742 590 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 PRDM14Q9GZV8 571 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 ADAM19Q9H013 955 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.27□□□□□ -0.77
HSPG2-202ENST00000374676 STOML1Q9UBI4 398 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 EGFL7Q9UHF1 273 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 MAGEL2Q9UJ55 1249 aa10.27□□□□□ -0.77
HSPG2-202ENST00000374676 SHISA8B8ZZ34 492 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 AP3D1O14617 1153 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 PRRG2O14669 202 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 FRS3O43559 492 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 EFNA2O43921 213 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 FMO6PO60774 539 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 TPOP07202 933 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 NCK1P16333 377 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF708P17019 499 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 TCN1P20061 433 aaPredicted RBP10.26□□□□□ -0.77
HSPG2-202ENST00000374676 GNLYP22749 145 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 TCEA1P23193 301 aaKnown RBP10.26□□□□□ -0.77
HSPG2-202ENST00000374676 ME2P23368 584 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 FKBP2P26885 142 aaKnown RBP10.26□□□□□ -0.77
HSPG2-202ENST00000374676 STARP49675 285 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 MAP2K6P52564 334 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 CLDN18P56856 261 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 RGS8P57771 180 aaPredicted RBP10.26□□□□□ -0.77
HSPG2-202ENST00000374676 TRIM25Q14258 630 aaKnown RBP10.26□□□□□ -0.77
HSPG2-202ENST00000374676 LRRC23Q53EV4 343 aaPredicted RBP10.26□□□□□ -0.77
HSPG2-202ENST00000374676 EMC4Q5J8M3 183 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 PGM2L1Q6PCE3 622 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 PLEKHM3Q6ZWE6 761 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 PM20D2Q8IYS1 436 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 EID3Q8N140 333 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 LSMEM1Q8N8F7 131 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 FAM156AQ8NDB6 213 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 OR5M1Q8NGP8 315 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 LZICQ8WZA0 190 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 PROX1Q92786 737 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 WDYHV1Q96HA8 205 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF559Q9BR84 538 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 THTPAQ9BU02 230 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 TRIM2Q9C040 744 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 MUC13Q9H3R2 512 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 DCAF13Q9NV06 445 aaKnown RBP10.26□□□□□ -0.77
HSPG2-202ENST00000374676 ADPRHL2Q9NX46 363 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 RPS6KA6Q9UK32 745 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 OSGIN2Q9Y236 505 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 SLC9A8Q9Y2E8 581 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 TENM4Q6N022 2769 aa10.26□□□□□ -0.77
HSPG2-202ENST00000374676 MED12LQ86YW9 2145 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 AHRRA9YTQ3 701 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 J3QKU1 62 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 GSC2O15499 205 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 ZNHIT1O43257 154 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 TPST2O60704 377 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 WDR1O75083 606 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 DNAJC8O75937 253 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 WISP1O95388 367 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 GABRA1P14867 456 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 POU3F2P20265 443 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 PTGER4P35408 488 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 MSX2P35548 267 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 UQCRFS1P47985 274 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 POLR2HP52434 150 aaKnown RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 CASP6P55212 293 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 HOXC5Q00444 222 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 MERTKQ12866 999 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 SELENBP1Q13228 472 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 SF3B4Q15427 424 aaKnown RBP eCLIP10.25□□□□□ -0.775e-6■■■■□ 26.7
HSPG2-202ENST00000374676 C3AR1Q16581 482 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 EIF2S3LQ2VIR3 472 aaKnown RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 DCST1Q5T197 706 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 CD163Q86VB7 1156 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 RANBP3LQ86VV4 465 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 ADGRG3Q86Y34 549 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 DOLPP1Q86YN1 238 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 OR6T1Q8NGN1 323 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 ZPLD1Q8TCW7 415 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 RELTQ969Z4 430 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 FAM162AQ96A26 154 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 WFDC6Q9BQY6 131 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms