RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 CDCA4Q9BXL8 241 aa15.49■□□□□ 0.07
PTPN20-203ENST00000374342 UBQLN3Q9H347 655 aa15.49■□□□□ 0.07
PTPN20-203ENST00000374342 AKIRIN1Q9H9L7 192 aaPredicted RBP15.49■□□□□ 0.07
PTPN20-203ENST00000374342 MPDZO75970 2070 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 GABARAPO95166 117 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 LCN1P31025 176 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 TGFBR2P37173 567 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 CCDC157Q569K6 752 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 RPL13AP3Q6NVV1 102 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 APCDD1LQ8NCL9 501 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 C17orf47Q8NEP4 570 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 NFAM1Q8NET5 270 aaPredicted RBP15.48■□□□□ 0.07
PTPN20-203ENST00000374342 C3orf49Q96BT1 292 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 TMEM80Q96HE8 168 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 SLC26A1Q9H2B4 701 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 EXOSC3Q9NQT5 275 aaKnown RBP15.48■□□□□ 0.07
PTPN20-203ENST00000374342 GPN3Q9UHW5 284 aaPredicted RBP15.48■□□□□ 0.07
PTPN20-203ENST00000374342 DMDP11532 3685 aa15.48■□□□□ 0.07
PTPN20-203ENST00000374342 TRBV11-1A0A0K0K1C0 115 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 PRODHO43272 600 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 GMFGO60234 142 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 RCBTB2O95199 551 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 SLC2A10O95528 541 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 BMP7P18075 431 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 MC2RQ01718 297 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 ZNF117Q03924 483 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 NFATC3Q12968 1075 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 AQP6Q13520 282 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 FAM69BQ5VUD6 431 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 WBP2NLQ6ICG8 309 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 SMARCD3Q6STE5 483 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 LINC00114Q6XXX2 140 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 ZNF367Q7RTV3 350 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 OR51A7Q8NH64 312 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 THAP3Q8WTV1 239 aaPredicted RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 C8orf44Q96CB5 159 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 LPAR4Q99677 370 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 TBL1XR1Q9BZK7 514 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 SEMA4CQ9C0C4 833 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 GPN2Q9H9Y4 310 aaPredicted RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 SIGLEC7Q9Y286 467 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 A0A087WUJ7 227 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 TRIM64BA6NI03 449 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 KDM4EB2RXH2 506 aaPredicted RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 M0R082 166 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 SCO2O43819 266 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 HCN1O60741 890 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 HMGN1P05114 100 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 CD36P16671 472 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 LIPAP38571 399 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 NRG3P56975 720 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 SPCS2Q15005 226 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 MED22Q15528 200 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 CTF1Q16619 201 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 PLA2G2CQ5R387 149 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 MRPL14Q6P1L8 145 aaKnown RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 FAM199XQ6PEV8 388 aaPredicted RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 THSD4Q6ZMP0 1018 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 C16orf47Q6ZP98 133 aaPredicted RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 CPEB2Q7Z5Q1 589 aaKnown RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 MARCH3Q86UD3 253 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 ANKK1Q8NFD2 765 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 MR1Q95460 341 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 RNFT2Q96EX2 444 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 VMP1Q96GC9 406 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 CRELD1Q96HD1 420 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 WDR77Q9BQA1 342 aaPredicted RBP15.47■□□□□ 0.07
PTPN20-203ENST00000374342 IFT27Q9BW83 186 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 ULBP3Q9BZM4 244 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 RTN4RQ9BZR6 473 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 ENKD1Q9H0I2 346 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 MED17Q9NVC6 651 aa15.47■□□□□ 0.07
PTPN20-203ENST00000374342 ELOA3DA6NLF2 546 aaPredicted RBP15.46■□□□□ 0.07
PTPN20-203ENST00000374342 SNTNA6NMZ2 147 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 C17orf51A8MQB3 221 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 HCRTR2O43614 444 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 APOL3O95236 402 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 HSMCR30P0CW71 290 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 GRK5P34947 590 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 PNLIPRP2P54317 469 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 ELOA3BQ3SY89 546 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 DBX2Q6ZNG2 339 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 OAFQ86UD1 273 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 ELOA3Q8NG57 546 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 OR52I1Q8NGK6 324 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 OR5M11Q96RB7 305 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 SLC24A3Q9HC58 644 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 SLC39A1Q9NY26 324 aa15.46■□□□□ 0.07
PTPN20-203ENST00000374342 C19orf25Q9UFG5 118 aaPredicted RBP15.46■□□□□ 0.07
PTPN20-203ENST00000374342 BHLHE40O14503 412 aa15.45■□□□□ 0.06
PTPN20-203ENST00000374342 NDUFB5O43674 189 aa15.45■□□□□ 0.06
PTPN20-203ENST00000374342 RAB36O95755 333 aa15.45■□□□□ 0.06
PTPN20-203ENST00000374342 ZNF182P17025 639 aaPredicted RBP15.45■□□□□ 0.06
PTPN20-203ENST00000374342 CDH11P55287 796 aa15.45■□□□□ 0.06
PTPN20-203ENST00000374342 LSM3P62310 102 aaKnown RBP15.45■□□□□ 0.06
PTPN20-203ENST00000374342 SF3A2Q15428 464 aaKnown RBP15.45■□□□□ 0.06
PTPN20-203ENST00000374342 FAM198BQ6UWH4 519 aa15.45■□□□□ 0.06
PTPN20-203ENST00000374342 BBS1Q8NFJ9 593 aa15.45■□□□□ 0.06
PTPN20-203ENST00000374342 ZNF563Q8TA94 476 aa15.45■□□□□ 0.06
PTPN20-203ENST00000374342 ZFAND2BQ8WV99 257 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms