RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ATP6V1C2Q8NEY4 427 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ZNF563Q8TA94 476 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ROBO4Q8WZ75 1007 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ZHX1-C8orf76Q96EF9 292 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ZC3HAV1LQ96H79 300 aaKnown RBP16.85■□□□□ 0.29
TMEM53-201ENST00000372235 TRNT1Q96Q11 434 aaKnown RBP16.85■□□□□ 0.29
TMEM53-201ENST00000372235 OR52E6Q96RD3 313 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ACTR6Q9GZN1 396 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 SERHL2Q9H4I8 314 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 BCO1Q9HAY6 547 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 ACER3Q9NUN7 267 aa16.85■□□□□ 0.29
TMEM53-201ENST00000372235 OIP5O43482 229 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 EFNA2O43921 213 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 SNNO75324 88 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-201ENST00000372235 CNOT4O95628 575 aaKnown RBP16.84■□□□□ 0.29
TMEM53-201ENST00000372235 UBTFL6P0CB48 400 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-201ENST00000372235 HOXC12P31275 282 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 SESN3P58005 492 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 NKX6-1P78426 367 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-201ENST00000372235 KCNJ10P78508 379 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 TOMM34Q15785 309 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-201ENST00000372235 GSTA3Q16772 222 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 TYW3Q6IPR3 259 aaKnown RBP16.84■□□□□ 0.29
TMEM53-201ENST00000372235 P3H2Q8IVL5 708 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 TUSC5Q8IXB3 177 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 ARFGAP2Q8N6H7 521 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 ABHD3Q8WU67 409 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 CCL19Q99731 98 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 C12orf49Q9H741 205 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 MANSC1Q9H8J5 431 aa16.84■□□□□ 0.29
TMEM53-201ENST00000372235 CCDC154A6NI56 674 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 FAM171A2A8MVW0 826 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 SDHDO14521 159 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 DNPH1O43598 174 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 SHC1P29353 583 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 PGM1P36871 562 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 PHC1P78364 1004 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 MERTKQ12866 999 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 FOXD4Q12950 439 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-201ENST00000372235 NDUFAF6Q330K2 333 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 PRSS57Q6UWY2 283 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 TFAP2EQ6VUC0 442 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 GRINAQ7Z429 371 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 CLEC4FQ8N1N0 589 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 FAM71CQ8NEG0 241 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 HSD17B8Q92506 261 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 MARK4Q96L34 752 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 OR5B2Q96R09 309 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 SRXN1Q9BYN0 137 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 RMND5AQ9H871 391 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 COQ10BQ9H8M1 238 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 MTHFD2LQ9H903 347 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-201ENST00000372235 UBTD1Q9HAC8 227 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 THUMPD1Q9NXG2 353 aaKnown RBP16.83■□□□□ 0.28
TMEM53-201ENST00000372235 CALML5Q9NZT1 146 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 EMC3Q9P0I2 261 aa16.83■□□□□ 0.28
TMEM53-201ENST00000372235 NUP214P35658 2090 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-201ENST00000372235 HIVEP1P15822 2718 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 A0A1W2PPR1 153 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 ZNF724A8MTY0 619 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 SULT2B1O00204 365 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 KLF11O14901 512 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 CYTIPO60759 359 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 SLC22A3O75751 556 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 IL32P24001 234 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 WDR4P57081 412 aaKnown RBP16.82■□□□□ 0.28
TMEM53-201ENST00000372235 UFM1P61960 85 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 RASGEF1BQ0VAM2 473 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 PDK3Q15120 406 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 ZSWIM7Q19AV6 140 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 PDCD4Q53EL6 469 aaKnown RBP16.82■□□□□ 0.28
TMEM53-201ENST00000372235 SYT14P1Q58G82 188 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 SFRP5Q5T4F7 317 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 ANKRD34AQ69YU3 496 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 NXNQ6DKJ4 435 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 FRRS1Q6ZNA5 592 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 LRRC74BQ6ZQY2 392 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 ZNF621Q6ZSS3 439 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 TMPPEQ6ZT21 453 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 MSANTD1Q6ZTZ1 278 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 PLEKHM3Q6ZWE6 761 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 PIWIL2Q8TC59 973 aaKnown RBP16.82■□□□□ 0.28
TMEM53-201ENST00000372235 RAB8BQ92930 207 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 KLHDC3Q9BQ90 382 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 CHRNA9Q9UGM1 479 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 KCNE5Q9UJ90 142 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 HDGFL3Q9Y3E1 203 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 GPR45Q9Y5Y3 372 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 CELSR1Q9NYQ6 3014 aa16.82■□□□□ 0.28
TMEM53-201ENST00000372235 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-201ENST00000372235 TMEM247A6NEH6 219 aa16.81■□□□□ 0.28
TMEM53-201ENST00000372235 HMGN4O00479 90 aa16.81■□□□□ 0.28
TMEM53-201ENST00000372235 RFXANKO14593 260 aa16.81■□□□□ 0.28
TMEM53-201ENST00000372235 SIAH2O43255 324 aa16.81■□□□□ 0.28
TMEM53-201ENST00000372235 H6PDO95479 791 aa16.81■□□□□ 0.28
TMEM53-201ENST00000372235 FESP07332 822 aa16.81■□□□□ 0.28
TMEM53-201ENST00000372235 ALDOCP09972 364 aaKnown RBP16.81■□□□□ 0.28
TMEM53-201ENST00000372235 EPHA3P29320 983 aa16.81■□□□□ 0.28
TMEM53-201ENST00000372235 MAGOHP61326 146 aaKnown RBP16.81■□□□□ 0.28
TMEM53-201ENST00000372235 ITGADQ13349 1161 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms