RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TESMINQ9Y4I5 508 aa9.56□□□□□ -0.88
COL5A1-202ENST00000371820 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 A0A1B0GUH1 482 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 ZAR1LA6NP61 321 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 C4orf51C9J302 202 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 FAM227AF5H4B4 570 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 DYRK3O43781 588 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CTNSO60931 367 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 DNAJB6O75190 326 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 F10P00742 488 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 TFPTP0C1Z6 253 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 BMP4P12644 408 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 GABRB1P18505 474 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CBLP22681 906 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 TGFBR2P37173 567 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 LIMS1P48059 325 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 EIF2B2P49770 351 aaKnown RBP9.55□□□□□ -0.88
COL5A1-202ENST00000371820 UGT2B15P54855 530 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 MANFP55145 182 aaKnown RBP9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CDH12P55289 794 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 LIM2P55344 173 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 HBA1P69905 142 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 RBPJQ06330 500 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 ST3GAL4Q11206 333 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 STX4Q12846 297 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 BIKQ13323 160 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 RUNX2Q13950 521 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 OR1C1Q15619 314 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 ELAVL1Q15717 326 aaKnown RBP9.55□□□□□ -0.88
COL5A1-202ENST00000371820 OCLNQ16625 522 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.55□□□□□ -0.88
COL5A1-202ENST00000371820 TMEM201Q5SNT2 666 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.55□□□□□ -0.88
COL5A1-202ENST00000371820 DEPDC1Q5TB30 811 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 KHDRBS2Q5VWX1 349 aaKnown RBP9.55□□□□□ -0.88
COL5A1-202ENST00000371820 FCRLBQ6BAA4 426 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CD300LDQ6UXZ3 194 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 C10orf111Q8N326 155 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 OR8J1Q8NGP2 316 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 NDNFQ8TB73 568 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 APH1BQ8WW43 257 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 RGMAQ96B86 450 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 TMCO6Q96DC7 493 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 TMEM80Q96HE8 168 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 F2RL3Q96RI0 385 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 SLX1AQ9BQ83 275 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 FAIM2Q9BWQ8 316 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 DEFB126Q9BYW3 111 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 AICDAQ9GZX7 198 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 NUAK2Q9H093 628 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CDCP1Q9H5V8 836 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 PRDM7Q9NQW5 492 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 PNO1Q9NRX1 252 aaKnown RBP9.55□□□□□ -0.88
COL5A1-202ENST00000371820 ACER3Q9NUN7 267 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 TAS2R7Q9NYW3 318 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 EHD3Q9NZN3 535 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CALML5Q9NZT1 146 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 LRFN1Q9P244 771 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 PHF11Q9UIL8 331 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CRYBG3Q68DQ2 2970 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 CNTRLQ7Z7A1 2325 aa9.55□□□□□ -0.88
COL5A1-202ENST00000371820 A8MUA0 341 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 ASNA1O43681 348 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 DIRAS1O95057 198 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 C6orf47O95873 294 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 TBX6O95947 436 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 TGFB1P01137 390 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 IFNA16P05015 189 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 ETFAP13804 333 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 DDCP20711 480 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 HIST1H1TP22492 207 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 CPN2P22792 545 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 ATP5A1P25705 553 aaKnown RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 TLX1P31314 330 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 BUD31P41223 144 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 IDH2P48735 452 aaKnown RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 CYB561P49447 251 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 RORCP51449 518 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 MVDP53602 400 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 PTGES3Q15185 160 aaKnown RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 EXOC3L2Q2M3D2 409 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 CCDC92Q53HC0 331 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 ANKRD34AQ69YU3 496 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 ADNP2Q6IQ32 1131 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 GFRALQ6UXV0 394 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 NCCRP1Q6ZVX7 275 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 SLC22A16Q86VW1 577 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 RNF130Q86XS8 419 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 SHISA5Q8N114 240 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 ACOT4Q8N9L9 421 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 MDS2Q8NDY4 140 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 NFAM1Q8NET5 270 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 PROKR2Q8NFJ6 384 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 TOR1AIP2Q8NFQ8 470 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 OR14A16Q8NHC5 309 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 NFKBIDQ8NI38 313 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 TXNDC15Q96J42 360 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 MGLLQ99685 303 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 COQ7Q99807 217 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 MND1Q9BWT6 205 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms