RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 GYPBP06028 91 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 TPOP07202 933 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 FBXO45P0C2W1 286 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 SYT13Q7L8C5 426 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 POGLUT1Q8NBL1 392 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 SLC38A5Q8WUX1 472 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 GLIPR2Q9H4G4 154 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 TRAV6A0A075B6T7 132 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 GABBR2O75899 941 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 STOMP27105 288 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 POLR2HP52434 150 aaKnown RBP13.73□□□□□ -0.21
NDC1-201ENST00000371429 UGT8Q16880 541 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 XKRXQ6PP77 449 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 AKAP1Q92667 903 aaKnown RBP eCLIP13.73□□□□□ -0.21
NDC1-201ENST00000371429 AMDHD1Q96NU7 426 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 QRSL1Q9H0R6 528 aaKnown RBP13.73□□□□□ -0.21
NDC1-201ENST00000371429 WIF1Q9Y5W5 379 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 TAPBPO15533 448 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 SORBS2O94875 1100 aaKnown RBP13.73□□□□□ -0.21
NDC1-201ENST00000371429 OPRD1P41143 372 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 WNT4P56705 351 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 HTRA4P83105 476 aaPredicted RBP13.73□□□□□ -0.21
NDC1-201ENST00000371429 ZNF45Q02386 682 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 KIAA1211LQ6NV74 962 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
NDC1-201ENST00000371429 SLC22A16Q86VW1 577 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
NDC1-201ENST00000371429 CCL4L1Q8NHW4 92 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 COQ10AQ96MF6 247 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 KDM4EB2RXH2 506 aaPredicted RBP13.73□□□□□ -0.21
NDC1-201ENST00000371429 BAIAP2L2Q6UXY1 529 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 LSMEM2Q8N112 164 aa13.73□□□□□ -0.21
NDC1-201ENST00000371429 DDX60LQ5H9U9 1706 aaKnown RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 NPR2P20594 1047 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 PSMA6P60900 246 aaKnown RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 RPL19P84098 196 aaKnown RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 TSC22D1Q15714 1073 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 GRK1Q15835 563 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 PLEKHN1Q494U1 663 aaPredicted RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 RNASE10Q5GAN6 216 aaKnown RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 UGT2A3Q6UWM9 527 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 SLC16A14Q7RTX9 510 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 OR7G1Q8NGA0 311 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 CPT1CQ8TCG5 803 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 MYEOVQ96EZ4 313 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 NECAB3Q96P71 396 aaPredicted RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 IGHV3-20A0A0C4DH32 117 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 METTL12A8MUP2 240 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 M0R129 80 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 PCDH17O14917 1159 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 BPNT1O95861 308 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 SLC26A5P58743 744 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 RAB15P59190 212 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 SIRPAP78324 504 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 SQSTM1Q13501 440 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 C1orf53Q5VUE5 145 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 YOD1Q5VVQ6 348 aaPredicted RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 ZNF709Q8N972 641 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 OR2T11Q8NH01 316 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 THOC3Q96J01 351 aaKnown RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 NXF5Q9H1B4 397 aaKnown RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 CDCP1Q9H5V8 836 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 CXorf36Q9H7Y0 433 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 RBMX2Q9Y388 322 aaKnown RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 OR6C70A6NIJ9 312 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 SFTPBP07988 381 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 CD83Q01151 205 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 MZT1Q08AG7 82 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 LILRA6Q6PI73 481 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 C5orf46Q6UWT4 87 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 DCDC5Q6ZRR9 648 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 GCDHQ92947 438 aaPredicted RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 FOXN4Q96NZ1 517 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 VSX1Q9NZR4 365 aaPredicted RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 A0A1B0GVC2 190 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 ISPDA4D126 451 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 INMT-MINDY4F8WBC2 141 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 PTHP01270 115 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 MYF6P23409 242 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 RGS6P49758 472 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 SLC35A1P78382 337 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 CCSAPQ6IQ19 270 aaPredicted RBP13.72□□□□□ -0.21
NDC1-201ENST00000371429 Q8N402 240 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 PIGQQ9BRB3 760 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 HINT2Q9BX68 163 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 SLC6A20Q9NP91 592 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 WNT16Q9UBV4 365 aa13.72□□□□□ -0.21
NDC1-201ENST00000371429 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 MPIG6BO95866 241 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 LIM2P55344 173 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 ATXN7L3Q14CW9 347 aaPredicted RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 ELAVL1Q15717 326 aaKnown RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 TMEM244Q5VVB8 128 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 VASNQ6EMK4 673 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 LANCL3Q6ZV70 420 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 CPPED1Q9BRF8 314 aaPredicted RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 NRSN2Q9GZP1 204 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 FAM86C1Q9NVL1 165 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 CEP290O15078 2479 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms