RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CLDN16Q9Y5I7 305 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 GXYLT2A0PJZ3 443 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 TLX2O43763 284 aaPredicted RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 SDC3O75056 442 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 RFPL3O75679 317 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 GABRA3P34903 492 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 RORCP51449 518 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 NXPH1P58417 271 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 MAT1AQ00266 395 aaKnown RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 MLLT1Q03111 559 aaPredicted RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 MAP4K2Q12851 820 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 TSPAN31Q12999 210 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 OCLNQ16625 522 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 FIGNL1Q6PIW4 674 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 ZAR1Q86SH2 424 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 LINC00518Q8N0U6 118 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 FAM26EQ8N5C1 309 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 GDPD1Q8N9F7 314 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 OR52R1Q8NGF1 315 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 OR8D4Q8NGM9 314 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 GNPDA2Q8TDQ7 276 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 POLDIP3Q9BY77 421 aaKnown RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 WNT16Q9UBV4 365 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 DIMT1Q9UNQ2 313 aaKnown RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 CMAHPQ9Y471 501 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 SPEGQ15772 3267 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 IGHV5-51A0A0C4DH38 117 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 LMO7DNF2Z398 122 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 OR10H2O60403 315 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 CDC123O75794 336 aaPredicted RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 OR5F1O95221 314 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 IFNA16P05015 189 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 NID1P14543 1247 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 RNF144AP50876 292 aaPredicted RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 RRAS2P62070 204 aaPredicted RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 PSG6Q00889 435 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 PLAURQ03405 335 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ZNF91Q05481 1191 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 POU4F3Q15319 338 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 DECR1Q16698 335 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 SLC25A30Q5SVS4 291 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ZNF367Q7RTV3 350 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 GPAT4Q86UL3 456 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 TMEM255BQ8WV15 326 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ACOT11Q8WXI4 607 aaPredicted RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 DACT3Q96B18 629 aaPredicted RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 PEX11GQ96HA9 241 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 PPA2Q9H2U2 334 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 MIXL1Q9H2W2 232 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ZC4H2Q9NQZ6 224 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 FBXL21Q9UKT6 434 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ABCA7Q8IZY2 2146 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 TMEM131Q92545 1883 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 OR2W5A6NFC9 320 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 FABP12A6NFH5 140 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 HRKO00198 91 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 MYL12BO14950 172 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 KLF4O43474 513 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 HRO43593 1189 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 BRINP1O60477 761 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 NKX2-2O95096 273 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 DBIP07108 87 aaKnown RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 GKN3PP0CG01 181 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 SPTBP11277 2137 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 RNH1P13489 461 aaKnown RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 MYL12AP19105 171 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 HTR2AP28223 471 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 EVI2BP34910 448 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 IFNGR2P38484 337 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 CBX5P45973 191 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 CSNK1EP49674 416 aaKnown RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 BAMBIQ13145 260 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 FAM53BQ14153 422 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ERV3-1Q14264 604 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 MED22Q15528 200 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 EIPR1Q53HC9 387 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 SYT14P1Q58G82 188 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 PDZK1Q5T2W1 519 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 MRPL2Q5T653 305 aaKnown RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 TMEM81Q6P7N7 255 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 OGFOD3Q6PK18 319 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 RASSF6Q6ZTQ3 369 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 HDDC2Q7Z4H3 204 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 MRGPREQ86SM8 312 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 GPALPP1Q8IXQ4 340 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ZBTB44Q8NCP5 570 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 C9orf43Q8TAL5 461 aaPredicted RBP11.84□□□□□ -0.51
GPC3-201ENST00000370818 TGM7Q96PF1 710 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 UQCC2Q9BRT2 126 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 TAPBPLQ9BX59 468 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 ABCB9Q9NP78 766 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 SNTG1Q9NSN8 517 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 SLC7A7Q9UM01 511 aa11.84□□□□□ -0.51
GPC3-201ENST00000370818 CDHR4A6H8M9 788 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 PIP5K1CO60331 668 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 BCKDHBP21953 392 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 SMSP52788 366 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms