RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ZNF446Q9NWS9 450 aa16.95■□□□□ 0.3
CKS1B-203ENST00000368439 MCTS1Q9ULC4 181 aaKnown RBP16.95■□□□□ 0.3
CKS1B-203ENST00000368439 PCDHB14Q9Y5E9 798 aa16.95■□□□□ 0.3
CKS1B-203ENST00000368439 ABCA4P78363 2273 aa16.95■□□□□ 0.3
CKS1B-203ENST00000368439 DSPPQ9NZW4 1301 aa16.95■□□□□ 0.3
CKS1B-203ENST00000368439 ENO4A6NNW6 628 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 ANP32DO95626 131 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 TFPTP0C1Z6 253 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 ETFAP13804 333 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 PGCP20142 388 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 HPCAP84074 193 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 CDH24Q86UP0 819 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 ZNF610Q8N9Z0 462 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 ROBO4Q8WZ75 1007 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 PMM1Q92871 262 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 GPATCH1Q9BRR8 931 aaKnown RBP16.94■□□□□ 0.3
CKS1B-203ENST00000368439 PRRG4Q9BZD6 226 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 MTHFD2LQ9H903 347 aaPredicted RBP16.94■□□□□ 0.3
CKS1B-203ENST00000368439 PLSCR4Q9NRQ2 329 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 ACER3Q9NUN7 267 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 CLEC4AQ9UMR7 237 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 AKAP6Q13023 2319 aa16.94■□□□□ 0.3
CKS1B-203ENST00000368439 GJE1A6NN92 205 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 SYNGR4O95473 234 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 NR2F1P10589 423 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 CPOXP36551 454 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 CD79BP40259 229 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 ATP4BP51164 291 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 STX1BP61266 288 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 C6orf10Q5SRN2 563 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 PPP4R4Q6NUP7 873 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 PLEKHM3Q6ZWE6 761 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 MSRB3Q8IXL7 192 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 CMIPQ8IY22 773 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 ATP6V1C2Q8NEY4 427 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 OR6K3Q8NGY3 331 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 RNF128Q8TEB7 428 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 CNOT9Q92600 299 aaKnown RBP16.93■□□□□ 0.3
CKS1B-203ENST00000368439 NRGNQ92686 78 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 CPNE4Q96A23 557 aaPredicted RBP16.93■□□□□ 0.3
CKS1B-203ENST00000368439 DACH2Q96NX9 599 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 GLRX2Q9NS18 164 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 DNAJB12Q9NXW2 375 aaKnown RBP16.93■□□□□ 0.3
CKS1B-203ENST00000368439 SLC25A37Q9NYZ2 338 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 PROCRQ9UNN8 238 aa16.93■□□□□ 0.3
CKS1B-203ENST00000368439 FREM1Q5H8C1 2179 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 A0A1W2PNR3 127 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 EDF1O60869 148 aaKnown RBP16.92■□□□□ 0.3
CKS1B-203ENST00000368439 CCKARP32238 428 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 CRATP43155 626 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 DSTNP60981 165 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 LRIF1Q5T3J3 769 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 C3orf33Q6P1S2 294 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 SLC38A5Q8WUX1 472 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 TMEM234Q8WY98 164 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 CCDC106Q9BWC9 280 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 POLDIP3Q9BY77 421 aaKnown RBP16.92■□□□□ 0.3
CKS1B-203ENST00000368439 ZNF385DQ9H6B1 395 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 ELOVL5Q9NYP7 299 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 CCDC167Q9P0B6 97 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 SLAMF8Q9P0V8 285 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 P2RX2Q9UBL9 471 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 EMC9Q9Y3B6 208 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 TESMINQ9Y4I5 508 aa16.92■□□□□ 0.3
CKS1B-203ENST00000368439 A0A096LPI6 279 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 SH3D21A4FU49 640 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 AP3D1O14617 1153 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 DBIP07108 87 aaKnown RBP16.91■□□□□ 0.3
CKS1B-203ENST00000368439 NUDT7P0C024 238 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 BMP2P12643 396 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 AGTR1P30556 359 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 RYKP34925 604 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 IRX1P78414 480 aaPredicted RBP16.91■□□□□ 0.3
CKS1B-203ENST00000368439 MERTKQ12866 999 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 RGNQ15493 299 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 TESK1Q15569 626 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 PAGE3Q5JUK9 113 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 ARFGAP2Q8N6H7 521 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 ABHD3Q8WU67 409 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 WDR60Q8WVS4 1066 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 SPDL1Q96EA4 605 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 THOC1Q96FV9 657 aaKnown RBP16.91■□□□□ 0.3
CKS1B-203ENST00000368439 CLEC4MQ9H2X3 399 aaPredicted RBP16.91■□□□□ 0.3
CKS1B-203ENST00000368439 TIGARQ9NQ88 270 aa16.91■□□□□ 0.3
CKS1B-203ENST00000368439 ING1Q9UK53 422 aaPredicted RBP16.91■□□□□ 0.3
CKS1B-203ENST00000368439 TRBV5-3A0A0A0MS03 114 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 CLIC1O00299 241 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 NR5A2O00482 541 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 PLGP00747 810 aaPredicted RBP16.9■□□□□ 0.3
CKS1B-203ENST00000368439 BCHEP06276 602 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 KLK2P20151 261 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 ENPP1P22413 925 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 UGT2B10P36537 528 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 CTBP2P56545 445 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 RAC3P60763 192 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 SQLEQ14534 574 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 MRPL2Q5T653 305 aaKnown RBP16.9■□□□□ 0.3
CKS1B-203ENST00000368439 FCRLAQ7L513 359 aa16.9■□□□□ 0.3
CKS1B-203ENST00000368439 GRINAQ7Z429 371 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms