RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TIGD2Q4W5G0 525 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 C3orf33Q6P1S2 294 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 C6orf120Q7Z4R8 191 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 ATG4DQ86TL0 474 aaPredicted RBP14.19□□□□□ -0.14
CKS1B-202ENST00000368436 ZNF619Q8N2I2 560 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 TMCO5AQ8N6Q1 288 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 SMAP2Q8WU79 429 aaPredicted RBP14.19□□□□□ -0.14
CKS1B-202ENST00000368436 ST8SIA1Q92185 356 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 NEUROG1Q92886 237 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 ARL8AQ96BM9 186 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 TUBGCP3Q96CW5 907 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 TRMT61AQ96FX7 289 aaKnown RBP14.19□□□□□ -0.14
CKS1B-202ENST00000368436 MDFIQ99750 246 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 THUMPD3Q9BV44 507 aaKnown RBP14.19□□□□□ -0.14
CKS1B-202ENST00000368436 PRSS50Q9UI38 385 aa14.19□□□□□ -0.14
CKS1B-202ENST00000368436 CHD3Q12873 2000 aaKnown RBP14.19□□□□□ -0.14
CKS1B-202ENST00000368436 CADP27708 2225 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ZNF724A8MTY0 619 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 STX11O75558 287 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 UGT2B17O75795 530 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 GUSBP08236 651 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 CREB1P16220 341 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 EDNRAP25101 427 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 IDUAP35475 653 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 SOAT1P35610 550 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ETV4P43268 484 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 SESN3P58005 492 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 BSPH1Q075Z2 132 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 RASGEF1BQ0VAM2 473 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 GPR68Q15743 365 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 AP1ARQ63HQ0 302 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 HEPHL1Q6MZM0 1159 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 CLECL1Q8IZS7 167 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 CLEC4FQ8N1N0 589 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ZIM3Q96PE6 472 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 OR5B2Q96R09 309 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ZNF300Q96RE9 604 aaPredicted RBP14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ROPN1BQ9BZX4 212 aaPredicted RBP14.18□□□□□ -0.14
CKS1B-202ENST00000368436 TRIM2Q9C040 744 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ZNF350Q9GZX5 532 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 QRSL1Q9H0R6 528 aaKnown RBP14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ROPN1Q9HAT0 212 aaPredicted RBP14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ACER3Q9NUN7 267 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 NOP53Q9NZM5 478 aaKnown RBP14.18□□□□□ -0.14
CKS1B-202ENST00000368436 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
CKS1B-202ENST00000368436 MAGED1Q9Y5V3 778 aaPredicted RBP14.18□□□□□ -0.14
CKS1B-202ENST00000368436 CENPVL1A0A0U1RR11 272 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 RNASET2O00584 256 aaKnown RBP14.17□□□□□ -0.14
CKS1B-202ENST00000368436 TYROBPO43914 113 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 LYZL6O75951 148 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 CSTAP01040 98 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 FESP07332 822 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 COX5AP20674 150 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 CCR4P51679 360 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 PGGHGQ32M88 737 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 PGS1Q32NB8 556 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 OR4F3Q6IEY1 312 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 DNM1P46Q6ZS02 220 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 TMPPEQ6ZT21 453 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 SSX8Q7RTT4 187 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 KBTBD8Q8NFY9 601 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 OR8J2Q8NGG1 315 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 MIPOL1Q8TD10 442 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 OIT3Q8WWZ8 545 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 TMEM234Q8WY98 164 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 SLC35G5Q96KT7 338 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 GRIP2Q9C0E4 1043 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 SERINC1Q9NRX5 453 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 MKLN1Q9UL63 735 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 LIPT1Q9Y234 373 aa14.17□□□□□ -0.14
CKS1B-202ENST00000368436 IGKV3D-15A0A087WSY6 115 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 GOLGA8QA0A0J9YX86 632 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 RNF103-CHMP3A0A140T963 221 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 GOLGA8OA6NCC3 632 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 C9JVG2 144 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 RNF223E7ERA6 249 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 GOLGA8NF8WBI6 632 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 SCN2BO60939 215 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 CRLF1O75462 422 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 CYP7B1O75881 506 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 PGM3O95394 542 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 CD8AP01732 235 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 PGCP20142 388 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 IGHV1-2P23083 117 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 PGM1P36871 562 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 CDKN1AP38936 164 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 DIO1P49895 249 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 MERTKQ12866 999 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 VEZF1Q14119 521 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 PDK3Q15120 406 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 PPA1Q15181 289 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 MAPK14Q16539 360 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 TIMM23BQ5SRD1 257 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 EIF3MQ7L2H7 374 aaKnown RBP14.16□□□□□ -0.14
CKS1B-202ENST00000368436 OLIG3Q7RTU3 272 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 P2RY8Q86VZ1 359 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 FAM71CQ8NEG0 241 aa14.16□□□□□ -0.14
CKS1B-202ENST00000368436 SLC25A43Q8WUT9 341 aaPredicted RBP14.16□□□□□ -0.14
CKS1B-202ENST00000368436 GTPBP3Q969Y2 492 aaKnown RBP14.16□□□□□ -0.14
CKS1B-202ENST00000368436 ZNF775Q96BV0 537 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms