RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 ILKQ13418 452 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 SLC17A1Q14916 467 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 TMED2Q15363 201 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 DLG2Q15700 870 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 CHI3L2Q15782 390 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 STXBP2Q15833 593 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 VAMP3Q15836 100 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 TATDN3Q17R31 274 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 TMEM44Q2T9K0 475 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 CHRFAM7AQ494W8 412 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 CTSL3PQ5NE16 218 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 CCNJQ5T5M9 372 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 TIGD3Q6B0B8 471 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 RNASEKQ6P5S7 137 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 GJB7Q6PEY0 223 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 METTL7BQ6UX53 244 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 C4orf22Q6V702 233 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 DET1Q7L5Y6 550 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 PLA2G4DQ86XP0 818 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 DCUN1D3Q8IWE4 304 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 HJURPQ8NCD3 748 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 PAPD5Q8NDF8 572 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 SEMA6DQ8NFY4 1073 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 ITFG1Q8TB96 612 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 SCARB1Q8WTV0 552 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 SLC25A28Q96A46 364 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 NXNL1Q96CM4 212 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 IGSF21Q96ID5 467 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 LMLNQ96KR4 655 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 C3orf30Q96M34 536 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 PACRGQ96M98 296 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 RAB40CQ96S21 281 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 ZNF347Q96SE7 839 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 CCT8L2Q96SF2 557 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 CENPKQ9BS16 269 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 ABHD14AQ9BUJ0 271 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 SLC38A1Q9H2H9 487 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 HIPK2Q9H2X6 1198 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 ELOVL6Q9H5J4 265 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 SMYD3Q9H7B4 428 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 RANGRFQ9HD47 186 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 PXMP2Q9NR77 195 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 ABI3Q9P2A4 366 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 EIF3KQ9UBQ5 218 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 LCMT1Q9UIC8 334 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 STOML2Q9UJZ1 356 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 ERVW-1Q9UQF0 538 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 OR10H1Q9Y4A9 318 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 ZNF532Q9HCE3 1301 aa4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 SPTBN1Q01082 2364 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-204ENST00000368292 PTPRDP23468 1912 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 A0A1W2PPM1 405 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 NEMP2A6NFY4 417 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 ZNF233A6NK53 670 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 ZNF98A6NK75 572 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 LINC01548A6NM66 108 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 ZNF729A6NN14 1252 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 NPIPA7E9PJI5 369 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 SMLR1H3BR10 107 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 PPP6CO00743 305 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 CCSO14618 274 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 CLOCKO15516 846 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 OGG1O15527 345 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 ZWINTO95229 277 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 H6PDO95479 791 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 SNAP29O95721 258 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 LATS1O95835 1130 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 SYF2O95926 243 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 APOC1P02654 83 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 PRKCGP05129 697 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 CALB1P05937 261 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 CRYGBP07316 175 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 HBQ1P09105 142 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 NPIPA8P0DM63 369 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 DBTP11182 482 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 XRCC1P18887 633 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 TPSB2P20231 275 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 PCMT1P22061 227 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 FCARP24071 287 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 AZGP1P25311 298 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 ELAVL4P26378 380 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 PSMB4P28070 264 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 MARCKSP29966 332 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 OR1D2P34982 312 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 PTGER4P35408 488 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 MAS1LP35410 378 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 GJC1P36383 396 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 TGFBR2P37173 567 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 OMPP47874 163 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 STK19P49842 368 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 ATP5J2P56134 94 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 OR2B6P58173 313 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 CDK16Q00536 496 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 FOXF2Q12947 444 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 TNK1Q13470 666 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 IL13RA2Q14627 380 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 KPNB1Q14974 876 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 EMC2Q15006 297 aa4.62□□□□□ -1.67
ECHDC1-204ENST00000368292 TPSAB1Q15661 275 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms