RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 C15orf54Q8N8G6 183 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 FAM133AQ8N9E0 248 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 OR1F12Q8NHA8 337 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 LINC01006Q8NI28 216 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 ANKRD49Q8WVL7 239 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 IL1F10Q8WWZ1 152 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 TRIM44Q96DX7 344 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 NUS1Q96E22 293 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 SH3YL1Q96HL8 342 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 IL4I1Q96RQ9 567 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 TBX15Q96SF7 602 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 ZNF184Q99676 751 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 RHBGQ9H310 441 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 SLC17A5Q9NRA2 495 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 SMPD3Q9NY59 655 aaPredicted RBP2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 IL36GQ9NZH8 169 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 LCMT1Q9UIC8 334 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 SNX6Q9UNH7 406 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 SCML2Q9UQR0 700 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 RLFQ13129 1914 aa2.42□□□□□ -2.02
ECHDC1-201ENST00000368287 IGHV1OR15-1A0A075B7D0 117 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 IGHV2-70DA0A0C4DH43 119 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 SMIM28A0A1B0GU29 152 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 A0A1B0GWB2 263 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 LRP5LA4QPB2 252 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 METTL21EPA6NDL7 271 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 B4DXG7 233 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 H0YCG3 227 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 SULT2B1O00204 365 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 PRKYO43930 277 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 ADCY5O95622 1261 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 TIMP1P01033 207 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 POLR2EP19388 210 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 LAP3P28838 519 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 EPHX2P34913 555 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 KIR2DS2P43631 304 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 HNMTP50135 292 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 PPT1P50897 306 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 PRKXP51817 358 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 EFNA3P52797 238 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 RIPK4P57078 832 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 KYAT1Q16773 422 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 SLC25A52Q3SY17 297 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 ANKDD1AQ495B1 522 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 LIPNQ5VXI9 398 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 C16orf62Q7Z3J2 963 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 TGIF2LYQ8IUE0 185 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 SKA3Q8IX90 412 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 CLEC4FQ8N1N0 589 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 CLDN19Q8N6F1 224 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 ANKFN1Q8N957 763 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 OR4D9Q8NGE8 314 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 C16orf74Q96GX8 76 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 SENP8Q96LD8 212 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 OMDQ99983 421 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 KLHDC3Q9BQ90 382 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 NMUR2Q9GZQ4 415 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 EHD1Q9H4M9 534 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 WARS2Q9UGM6 360 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 TMCC3Q9ULS5 477 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 ERVW-1Q9UQF0 538 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 WDR45Q9Y484 360 aa2.41□□□□□ -2.02
ECHDC1-201ENST00000368287 A0A0G2JRQ6 117 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 MBLAC1A4D2B0 266 aaPredicted RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 FAM231BA6NCW3 169 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 RS1O15537 224 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 GNA14O95837 355 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 ACTL6AO96019 429 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 SEMG1P04279 462 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 CALB2P22676 271 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 RBMXP38159 391 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 LEPP41159 167 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 HLCSP50747 726 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 AP3M2P53677 418 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 BIDP55957 195 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 RIPPLY3P57055 190 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 TATDN3Q17R31 274 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 LRRC36Q1X8D7 754 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 C2orf83Q53S99 150 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 HSD17B13Q7Z5P4 300 aaPredicted RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF589Q86UQ0 364 aaPredicted RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 TPRA1Q86W33 373 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 OR2L13Q8N349 312 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 ATP6V0D2Q8N8Y2 350 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 OR52M1Q8NGK5 317 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 OR4D5Q8NGN0 318 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 OR56B4Q8NH76 319 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 SETD7Q8WTS6 366 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 PIGCQ92535 297 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 TGM7Q96PF1 710 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 TECTBQ96PL2 329 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 SECISBP2Q96T21 854 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 TXN2Q99757 166 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 SPATA16Q9BXB7 569 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 POLR1EQ9GZS1 481 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 GORASP2Q9H8Y8 452 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 ISG20L2Q9H9L3 353 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 RNF14Q9UBS8 474 aa2.4□□□□□ -2.03
ECHDC1-201ENST00000368287 PCSK1NQ9UHG2 260 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms