RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 POM121CA8CG34 1229 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 hCG_2039718K7EN88 272 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 SCDO00767 359 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 NUDT14O95848 222 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 SAGP10523 405 aaPredicted RBP12.67□□□□□ -0.38
VAMP4-202ENST00000367740 HPGDP15428 266 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 CRABP2P29373 138 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 SSTR1P30872 391 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 SLC1A3P43003 542 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 IL13RA1P78552 427 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 PDK3Q15120 406 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 ADRM1Q16186 407 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 IKBIPQ70UQ0 350 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 ZBED8Q8IZ13 594 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 C22orf15Q8WYQ4 148 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 SLC38A2Q96QD8 506 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 DOK1Q99704 481 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 KATNB1Q9BVA0 655 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 UBQLN4Q9NRR5 601 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 NMRK1Q9NWW6 199 aa12.67□□□□□ -0.38
VAMP4-202ENST00000367740 CCDC189A1A4V9 331 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 FAM159BA6NKW6 160 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 KCNK2O95069 426 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 WNT11O96014 354 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 CHN1P15882 459 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 DDCP20711 480 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-202ENST00000367740 GPR6P46095 362 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-202ENST00000367740 DIO1P49895 249 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-202ENST00000367740 P2RX1P51575 399 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 PRPS1P60891 318 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 LMO4P61968 165 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 FAM83EQ2M2I3 478 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 SLC25A53Q5H9E4 307 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 C1QTNF12Q5T7M4 302 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 C3orf33Q6P1S2 294 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 RPS27LQ71UM5 84 aaKnown RBP12.66□□□□□ -0.38
VAMP4-202ENST00000367740 FBXO30Q8TB52 745 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 RNF217Q8TC41 542 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 GPR119Q8TDV5 335 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 LRRC58Q96CX6 371 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 PBKQ96KB5 322 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 DUX5Q96PT3 197 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 KCNS3Q9BQ31 491 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 EBPLQ9BY08 206 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 NTN4Q9HB63 628 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 SNX6Q9UNH7 406 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 CORINQ9Y5Q5 1042 aa12.66□□□□□ -0.38
VAMP4-202ENST00000367740 TCRBV9S1A1TA0A576 114 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 TMEM129A0AVI4 362 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 DNAJC9-AS1A6NH13 148 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 PPP6CO00743 305 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 KLF11O14901 512 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 MRPL33O75394 65 aaKnown RBP12.65□□□□□ -0.38
VAMP4-202ENST00000367740 CRYAAP02489 173 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 ACP2P11117 423 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 PRTN3P24158 256 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 GCH1P30793 250 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
VAMP4-202ENST00000367740 SUMO3P55854 103 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-202ENST00000367740 TUSC1Q2TAM9 212 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 HIKESHIQ53FT3 197 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 ELFN2Q5R3F8 820 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 KLHL24Q6TFL4 600 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 CDK20Q8IZL9 346 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 OR6Y1Q8NGX8 325 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 PHOSPHO1Q8TCT1 267 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 TAF15Q92804 592 aaKnown RBP eCLIP12.65□□□□□ -0.38
VAMP4-202ENST00000367740 PHF21BQ96EK2 531 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 C1orf147Q96MC9 270 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-202ENST00000367740 GPR78Q96P69 363 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 TPK1Q9H3S4 243 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 SLC7A10Q9NS82 523 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 ZNF225Q9UK10 706 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 CARD8Q9Y2G2 431 aa12.65□□□□□ -0.38
VAMP4-202ENST00000367740 SH3PXD2BA1X283 911 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 ETV2O00321 342 aaPredicted RBP12.64□□□□□ -0.39
VAMP4-202ENST00000367740 SEC31AO94979 1220 aaKnown RBP12.64□□□□□ -0.39
VAMP4-202ENST00000367740 PRSS23O95084 383 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 FSHBP01225 129 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 IFI6P09912 130 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 TYK2P29597 1187 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 CALCRP30988 508 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 NTSP30990 170 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 LCN1P31025 176 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 TIA1P31483 386 aaKnown RBP eCLIP12.64□□□□□ -0.39
VAMP4-202ENST00000367740 NAAAQ02083 359 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 NDUFAF6Q330K2 333 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 VPS26BQ4G0F5 336 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 TECRLQ5HYJ1 363 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 CCNJQ5T5M9 372 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 GRTP1Q5TC63 336 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 ZNF662Q6ZS27 426 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 TMPPEQ6ZT21 453 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
VAMP4-202ENST00000367740 MTDHQ86UE4 582 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms