RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 SLC35F3Q8IY50 421 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 INTS6Q9UL03 887 aaKnown RBP11.71□□□□□ -0.54
TPR-201ENST00000367478 PUS1Q9Y606 427 aaKnown RBP eCLIP11.71□□□□□ -0.54
TPR-201ENST00000367478 GABRR1P24046 479 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 RABIFP47224 123 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 LARP4Q71RC2 724 aaKnown RBP eCLIP11.71□□□□□ -0.547e-10■□□□□ 10.2
TPR-201ENST00000367478 KLHDC8AQ8IYD2 350 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 KDM1BQ8NB78 822 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 NDNFQ8TB73 568 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 PELI2Q9HAT8 420 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 CSNK1A1P48729 337 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 HEPHL1Q6MZM0 1159 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 KDM8Q8N371 416 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 OR5B2Q96R09 309 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 SLC7A7Q9UM01 511 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 SCML1Q9UN30 329 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 ETV7Q9Y603 341 aa11.71□□□□□ -0.54
TPR-201ENST00000367478 A0A1W2PPH5 198 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 ADAM23O75077 832 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 ZNF623O75123 536 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 MPPED2Q15777 294 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 APOOLQ6UXV4 268 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 KCNRGQ8N5I3 272 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 NIPAL2Q9H841 368 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 YTHDF2Q9Y5A9 579 aaKnown RBP11.7□□□□□ -0.54
TPR-201ENST00000367478 TGOLN2O43493 480 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 TACR3P29371 465 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 STEAP3Q658P3 488 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 TECPR1Q7Z6L1 1165 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 EID2Q8N6I1 236 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 MMP28Q9H239 520 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 A0A087WZY1 265 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 HTRA4P83105 476 aaPredicted RBP11.7□□□□□ -0.54
TPR-201ENST00000367478 BTNL2Q9UIR0 455 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 GPR52Q9Y2T5 361 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 PARP4Q9UKK3 1724 aaKnown RBP11.7□□□□□ -0.54
TPR-201ENST00000367478 ZNF860A6NHJ4 632 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 HPGDSO60760 199 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 SDC3O75056 442 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 ELNP15502 786 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 LTB4RQ15722 352 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 ZNF791Q3KP31 576 aaPredicted RBP11.7□□□□□ -0.54
TPR-201ENST00000367478 C1QTNF2Q9BXJ5 285 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 CLDND1Q9NY35 253 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 B4GALT6Q9UBX8 382 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 MAN2B1O00754 1011 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 GPR17Q13304 367 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 RNF151Q2KHN1 245 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 MSS51Q4VC12 460 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 FRS2Q8WU20 508 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 IL1F10Q8WWZ1 152 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 ZNF281Q9Y2X9 895 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 IGLV3-22A0A075B6J6 115 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 GLB1P16278 677 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
TPR-201ENST00000367478 C1orf87Q8N0U7 546 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 LSMEM2Q8N112 164 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 OR2T11Q8NH01 316 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 INSL5Q9Y5Q6 135 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 UBR1Q8IWV7 1749 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 EGLN3Q9H6Z9 239 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 KCNK12Q9HB15 430 aa11.7□□□□□ -0.54
TPR-201ENST00000367478 TO15178 435 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 TOX4O94842 621 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 ZIC2O95409 532 aaPredicted RBP11.69□□□□□ -0.54
TPR-201ENST00000367478 S1PR4O95977 384 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 CD53P19397 219 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 DTYMKP23919 212 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 AKR1C1Q04828 323 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 LTBQ06643 244 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 MEP1BQ16820 701 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 ZNF425Q6IV72 752 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 CPOQ8IVL8 374 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 DMBX1Q8NFW5 382 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 OR1S2Q8NGQ3 325 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 FAM71F1Q96KD3 344 aaPredicted RBP11.69□□□□□ -0.54
TPR-201ENST00000367478 PSD2Q9BQI7 771 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 GKN1Q9NS71 199 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 SEMA4GQ9NTN9 838 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 NAV1Q8NEY1 1877 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 TMX2-CTNND1H3BSU7 103 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 PEX10O60683 326 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 IGHG1P01857 330 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 HOXA1P49639 335 aaPredicted RBP11.69□□□□□ -0.54
TPR-201ENST00000367478 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
TPR-201ENST00000367478 DOC2AQ14183 400 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 OR4A16Q8NH70 328 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 MED30Q96HR3 178 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 COPS3Q9UNS2 423 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 LEFTY1O75610 366 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 CAPNS1P04632 268 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 TBPP20226 339 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
TPR-201ENST00000367478 UNC50Q53HI1 259 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 TXNDC8Q6A555 127 aa11.69□□□□□ -0.54
TPR-201ENST00000367478 ZNF322Q6U7Q0 402 aaPredicted RBP11.69□□□□□ -0.54
TPR-201ENST00000367478 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms