RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 MS4A6EQ96DS6 147 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ELMOD3Q96FG2 381 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 LRRC3BQ96PB8 259 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 OR14A2Q96R54 314 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PDCD1LG2Q9BQ51 273 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 ZNF443Q9Y2A4 671 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 KIAA1549LQ6ZVL6 1849 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ATG2BQ96BY7 2078 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 A0A087WV48 116 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 C17orf113A0A1B0GUU1 675 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 LGALS8O00214 317 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 SYT5O00445 386 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ACSM4P0C7M7 580 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 SLC35G4P0C7Q5 338 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ADRB3P13945 408 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ATP5A1P25705 553 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 HTR2AP28223 471 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 MLC1Q15049 377 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ZMYND11Q15326 602 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 FNDC3BQ53EP0 1204 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 TCTE1Q5JU00 501 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 HES5Q5TA89 166 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 OR56A1Q8NGH5 318 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 OR52L1Q8NGH7 329 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 OR2A1Q8NGT9 310 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 RBPMSQ93062 196 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 HGDQ93099 445 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ZMYND19Q96E35 227 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 AHCYL2Q96HN2 611 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 CXorf58Q96LI9 332 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PBX4Q9BYU1 374 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 TMEM168Q9H0V1 697 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PRDM7Q9NQW5 492 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 MRPL39Q9NYK5 338 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 KLK11Q9UBX7 282 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 WDR45Q9Y484 360 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 LRRN3E7EW58 273 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 PRR23D1E9PI22 279 aaPredicted RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 BHLHE40O14503 412 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 GNB5O14775 395 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 ARPC1BO15143 372 aaKnown RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 EMC8O43402 210 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 MOSPD3O75425 235 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 PPP1R3DO95685 299 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 PRR23D2P0DMB1 279 aaPredicted RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 BMP7P18075 431 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 PSMB10P40306 273 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 RAD52P43351 418 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 MLF2Q15773 248 aaPredicted RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 BTN2A1Q7KYR7 527 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 KCT2Q8NC54 265 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 OR11G2Q8NGC1 345 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 GRHL3Q8TE85 626 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 LINC00615Q96LM1 132 aaPredicted RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 PRSS27Q9BQR3 290 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 GSX2Q9BZM3 304 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 LRRN3Q9H3W5 708 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 FKRPQ9H9S5 495 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 MED17Q9NVC6 651 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 H3BSH0 61 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 SIGLEC5O15389 551 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 PLPP2O43688 288 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 DNAJB6O75190 326 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 UBL3O95164 117 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 TFP02787 698 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 GAAP10253 952 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 ANXA11P50995 505 aaKnown RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 FOXK2Q01167 660 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 SIGLEC14Q08ET2 396 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 ABHD17CQ6PCB6 329 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 GID4Q8IVV7 300 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 SLC44A3Q8N4M1 653 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 ZNF433Q8N7K0 673 aaPredicted RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 SRFBP1Q8NEF9 429 aaKnown RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 SMPDL3BQ92485 455 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 KCTD12Q96CX2 325 aaKnown RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 ZNF514Q96K75 400 aaPredicted RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 SFXN2Q96NB2 322 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 INSM2Q96T92 566 aaPredicted RBP12.58□□□□□ -0.4
PRKN-205ENST00000366897 CD180Q99467 661 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 C1QTNF2Q9BXJ5 285 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 RPS6KB2Q9UBS0 482 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 MAB21L2Q9Y586 359 aa12.58□□□□□ -0.4
PRKN-205ENST00000366897 ANKRD61A6NGH8 418 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 ATP6V1G2-DDX39BF2Z307 99 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 PEX12O00623 359 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 TSPAN9O75954 239 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 OR5F1O95221 314 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 CXCL14O95715 111 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 SBK2P0C263 348 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 EPXP11678 715 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 F3P13726 295 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 ZNF136P52737 540 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 KIAA1024LP59773 190 aa12.57□□□□□ -0.4
PRKN-205ENST00000366897 PRDX1Q06830 199 aaKnown RBP12.57□□□□□ -0.4
PRKN-205ENST00000366897 KLF9Q13886 244 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms