RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 UBE2NLQ5JXB2 153 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 METTL3Q86U44 580 aaKnown RBP13.86□□□□□ -0.19
UBAP1-202ENST00000359544 NSMAFQ92636 917 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 UBE2E3Q969T4 207 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 PNPLA2Q96AD5 504 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 SLC35G5Q96KT7 338 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 NOX3Q9HBY0 568 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 ZNF840PA6NDX5 716 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 ASGR2P07307 311 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 RORAP35398 523 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 CAPZA2P47755 286 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 DLX5P56178 289 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 GMFBP60983 142 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 SLC3A1Q07837 685 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 TSC22D1Q15714 1073 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 CCDC157Q569K6 752 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 SLC8B1Q6J4K2 584 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 LINGO2Q7L985 606 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 ADCK2Q7Z695 626 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 CPOQ8IVL8 374 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 TMIEQ8NEW7 156 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 OR2T33Q8NG76 320 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 XAGE5Q8WWM1 108 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 PINK1Q9BXM7 581 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 COL25A1Q9BXS0 654 aaPredicted RBP13.86□□□□□ -0.19
UBAP1-202ENST00000359544 HINT3Q9NQE9 182 aaKnown RBP13.86□□□□□ -0.19
UBAP1-202ENST00000359544 BIN3Q9NQY0 253 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 SIRT3Q9NTG7 399 aaPredicted RBP13.86□□□□□ -0.19
UBAP1-202ENST00000359544 NTMQ9P121 344 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 PPIL1Q9Y3C6 166 aa13.86□□□□□ -0.19
UBAP1-202ENST00000359544 NPC1O15118 1278 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 B4GALT2O60909 372 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 GATBO75879 557 aaKnown RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 RASGRP1O95267 797 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 EPXP11678 715 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ATF1P18846 271 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 MEOX2P50222 304 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 LGALS3BPQ08380 585 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ST3GAL3Q11203 375 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ACSM3Q53FZ2 586 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ZNF660Q6AZW8 331 aaPredicted RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 RAB11FIP2Q7L804 512 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 C2orf15Q8WU43 125 aaKnown RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 TCEAL4Q96EI5 215 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 UTP23Q9BRU9 249 aaKnown RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 BCL2L10Q9HD36 194 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 TDP1Q9NUW8 608 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 MRPL15Q9P015 296 aaKnown RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 KLHL9Q9P2J3 617 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 PRAMEF27A3QJZ7 478 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 GABARAPH6UMI1 98 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 H7C4K7 107 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 NRG2O14511 850 aaPredicted RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 FLRT2O43155 660 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 SIX6O95475 246 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 EPPINO95925 133 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 SERPINA3P01011 423 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ATP1B1P05026 303 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 NPPBP16860 134 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 TSTA3Q13630 321 aaPredicted RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ZNF461Q8TAF7 563 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 SUN3Q8TAQ9 357 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 THEM6Q8WUY1 208 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 ORAI1Q96D31 301 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 EXOSC3Q9NQT5 275 aaKnown RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 TRPC4Q9UBN4 977 aa13.85□□□□□ -0.19
UBAP1-202ENST00000359544 NOSIPQ9Y314 301 aaKnown RBP13.85□□□□□ -0.19
UBAP1-202ENST00000359544 FXYD6-FXYD2A0A087WZ82 144 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 UBE2QL1A1L167 161 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 ANKRD61A6NGH8 418 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 OR2AG2A6NM03 316 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 KHDRBS3O75525 346 aaKnown RBP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 RAB13P51153 203 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 MECP2P51608 486 aaKnown RBP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 POLR2GP62487 172 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 SIM1P81133 766 aaPredicted RBP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 SMAD4Q13485 552 aaKnown RBP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 LTB4RQ15722 352 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 OLFML2AQ68BL7 652 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 MTFR2Q6P444 385 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 ZNF620Q6ZNG0 422 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 ESPNLQ6ZVH7 1005 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 MEPCEQ7L2J0 689 aaKnown RBP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 GRASPQ7Z6J2 395 aaPredicted RBP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 TMEM99Q8N816 258 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 OR2AP1Q8NGE2 309 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 OR4D9Q8NGE8 314 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 OR6K3Q8NGY3 331 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 ZNF671Q8TAW3 534 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 ASB12Q8WXK4 309 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 DMRTA2Q96SC8 542 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 TBX5Q99593 518 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 TIMP4Q99727 224 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 FXYD6Q9H0Q3 95 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 SLC13A4Q9UKG4 626 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 PCDHGA9Q9Y5G4 932 aaKnown RBP13.84□□□□□ -0.19
UBAP1-202ENST00000359544 KRT33AO76009 404 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 ABLIM3O94929 683 aa13.84□□□□□ -0.19
UBAP1-202ENST00000359544 TBXA2RP21731 343 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms