RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PGCP20142 388 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 MSX1P28360 303 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 ETV5P41161 510 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 SLC9A3P48764 834 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 RPS15P62841 145 aaKnown RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 SLC35A2P78381 396 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 MVKQ03426 396 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 C17orf67Q0P5P2 114 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 FOXD4Q12950 439 aaPredicted RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 TUBA3CQ13748 450 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 CBFBQ13951 182 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 GINS1Q14691 196 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 OCLNQ16625 522 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 C3orf38Q5JPI3 329 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 TMEM201Q5SNT2 666 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 LAIR2Q6ISS4 152 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 UNQ6494/PRO21346Q6UXR6 183 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 MARCH9Q86YJ5 346 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 FAM26EQ8N5C1 309 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 POGLUT1Q8NBL1 392 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 CNIH3Q8TBE1 160 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 BRIX1Q8TDN6 353 aaKnown RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 FGF11Q92914 225 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 MYDGFQ969H8 173 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 FAM46AQ96IP4 442 aaKnown RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 IMMP1LQ96LU5 166 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 TMEM43Q9BTV4 400 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 AKIRIN1Q9H9L7 192 aaPredicted RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 SDHAF3Q9NRP4 125 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 CNOT2Q9NZN8 540 aaKnown RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 MYOTQ9UBF9 498 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 ICAM5Q9UMF0 924 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 BAIAP2Q9UQB8 552 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 FARSAQ9Y285 508 aaKnown RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 NTNG1Q9Y2I2 539 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 CDH10Q9Y6N8 788 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 A0A1W2PNU3 283 aaPredicted RBP12.35□□□□□ -0.43
CCDC197-201ENST00000359253 EFCAB10A6NFE3 127 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 UNC119BA6NIH7 251 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 HCN1O60741 890 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 FAM20BO75063 409 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 IFI30P13284 250 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 BMP7P18075 431 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 EVI2BP34910 448 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 SLC1A3P43003 542 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 P2RX1P51575 399 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 SUMO3P55854 103 aaPredicted RBP12.35□□□□□ -0.43
CCDC197-201ENST00000359253 TBC1D25Q3MII6 688 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 ANKDD1AQ495B1 522 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 TMEM81Q6P7N7 255 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 FAM199XQ6PEV8 388 aaPredicted RBP12.35□□□□□ -0.43
CCDC197-201ENST00000359253 ZNF620Q6ZNG0 422 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 PRSS48Q7RTY5 328 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 CYP4Z2PQ8N1L4 340 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 ZNF540Q8NDQ6 660 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 OR5W2Q8NH69 310 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 RNF138Q8WVD3 245 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 APH1BQ8WW43 257 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 DGCR14Q96DF8 476 aaKnown RBP12.35□□□□□ -0.43
CCDC197-201ENST00000359253 BPIFA2Q96DR5 249 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 ARSGQ96EG1 525 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 LMF1Q96S06 567 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 SECISBP2Q96T21 854 aaKnown RBP12.35□□□□□ -0.43
CCDC197-201ENST00000359253 ASCL3Q9NQ33 180 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 RASSF1Q9NS23 344 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 ZNF226Q9NYT6 803 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 TCFL5Q9UL49 500 aa12.35□□□□□ -0.43
CCDC197-201ENST00000359253 NSG1A0A0A6YYJ2 146 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 IRGMA1A4Y4 181 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CDC14CA4D256 554 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 TMEM200CA6NKL6 621 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CLCA1A8K7I4 914 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 EFCAB9A8MZ26 197 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 C9orf172C9J069 976 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 RGS10O43665 173 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CDC40O60508 579 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC197-201ENST00000359253 NADKO95544 446 aaPredicted RBP12.34□□□□□ -0.43
CCDC197-201ENST00000359253 FBXO45P0C2W1 286 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 COX6A1P12074 109 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
CCDC197-201ENST00000359253 TCN2P20062 427 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 HTR3AP46098 478 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 PCYT1AP49585 367 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 MAP2K6P52564 334 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CDH15P55291 814 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CD226Q15762 336 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 BTBD16Q32M84 506 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 ZBED5Q49AG3 693 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 NADK2Q4G0N4 442 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 KIRREL2Q6UWL6 708 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 C5orf46Q6UWT4 87 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 APOOLQ6UXV4 268 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 KCTD8Q6ZWB6 473 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 GPR141Q7Z602 305 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 PRR22Q8IZ63 422 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 SPARTQ8N0X7 666 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 ARMC10Q8N2F6 343 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 CADM2Q8N3J6 435 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 OR2T33Q8NG76 320 aa12.34□□□□□ -0.43
CCDC197-201ENST00000359253 OR52L1Q8NGH7 329 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms