RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SLC6A16Q9GZN6 736 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 NOX3Q9HBY0 568 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 KCNJ16Q9NPI9 418 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 PRSS38A1L453 326 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 PRDX3P30048 256 aaKnown RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 SLC14A1Q13336 389 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 SF3B4Q15427 424 aaKnown RBP eCLIP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 AARDQ4LEZ3 155 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF585AQ6P3V2 769 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 MEPCEQ7L2J0 689 aaKnown RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 OLAHQ9NV23 265 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 KCPQ6ZWJ8 1503 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 D6RAR5 112 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 ITGB7P26010 798 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 HOXA9P31269 272 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF33BQ06732 778 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 HEPHL1Q6MZM0 1159 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 PODNL1Q6PEZ8 512 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 VHLLQ6RSH7 139 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 OR2A12Q8NGT7 310 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 BRIX1Q8TDN6 353 aaKnown RBP17.22■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF419Q96HQ0 510 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-202ENST00000359082 C17orf113A0A1B0GUU1 675 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 TRAPPC2LH3BP13 241 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF623O75123 536 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 CRYZL1O95825 349 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 CA3P07451 260 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 HTR3AP46098 478 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 WNT7BP56706 349 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 MEF2DQ14814 521 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 NDUFAF7Q7L592 441 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 B3GNT8Q7Z7M8 397 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 C12orf45Q8N5I9 185 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-202ENST00000359082 GPR150Q8NGU9 434 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 ENTPD2Q9Y5L3 495 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 SNRNP70P08621 437 aaKnown RBP17.22■□□□□ 0.35
SHANK1-202ENST00000359082 SSTR2P30874 369 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 PRKAR1BP31321 381 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 DYNLRB1Q9NP97 96 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 PRAMEF27A3QJZ7 478 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 PVRP15151 417 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 DRD1P21728 446 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 PRAMEF9Q5VWM5 478 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 TMPRSS7Q7RTY8 843 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 EHFQ9NZC4 300 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 EIF3FO00303 357 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-202ENST00000359082 FANCGO15287 622 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 GJB3O75712 270 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 GPX3P22352 226 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 COX15Q7KZN9 410 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 KANSL1Q7Z3B3 1105 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 TMEM163Q8TC26 289 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF486Q96H40 463 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-202ENST00000359082 SORCS2Q96PQ0 1159 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 RASD1Q9Y272 281 aa17.22■□□□□ 0.35
SHANK1-202ENST00000359082 B4GAT1O43505 415 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 HOXB5P09067 269 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 ACPPP15309 386 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 GIFP27352 417 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 CLDN6P56747 220 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 PAN3Q58A45 887 aaKnown RBP17.21■□□□□ 0.35
SHANK1-202ENST00000359082 CMPK2Q5EBM0 449 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 SIMC1Q8NDZ2 872 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 OR5L1Q8NGL2 311 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 MIB2Q96AX9 1013 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 NENFQ9UMX5 172 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 LOC105369274A0A096LPK9 316 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 FAM183AA6NL82 134 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 HIDE1A8MVS5 230 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 SULT1B1O43704 296 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 TIMP1P01033 207 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 LTBQ06643 244 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 LYSMD4Q5XG99 296 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 OR4N4Q8N0Y3 316 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 DAZAP1Q96EP5 407 aaKnown RBP17.21■□□□□ 0.35
SHANK1-202ENST00000359082 NICN1Q9BSH3 213 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 NMNAT2Q9BZQ4 307 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 HRH4Q9H3N8 390 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 PRMT8Q9NR22 394 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF142P52746 1687 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-202ENST00000359082 PRKACBP22694 351 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 MBTPS1Q14703 1052 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 EMC10Q5UCC4 262 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 TSSK4Q6SA08 328 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 KDELC1Q6UW63 502 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 OR8J2Q8NGG1 315 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 ZFAND1Q8TCF1 268 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 SLC38A1Q9H2H9 487 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 EGLN3Q9H6Z9 239 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 TSPAN11A1L157 253 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 CDKN3Q16667 212 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 C14orf28Q4W4Y0 310 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 MAMDC4Q6UXC1 1216 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 SERPINA11Q86U17 422 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF808Q8N4W9 903 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-202ENST00000359082 ZFP90Q8TF47 636 aa17.21■□□□□ 0.35
SHANK1-202ENST00000359082 SAT2Q96F10 170 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-202ENST00000359082 FAM234AQ9H0X4 552 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms