RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 A0A1W2PQL4 384 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 FGFBP1Q14512 234 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 TMEM139Q8IV31 216 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 GOT1L1Q8NHS2 421 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 UTP23Q9BRU9 249 aaKnown RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 GPR83Q9NYM4 423 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 ZDBF2Q9HCK1 2354 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 KCNE1P15382 129 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 NKAIN2Q5VXU1 208 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 FAM198BQ6UWH4 519 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 MMP21Q8N119 569 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 BHLHE23Q8NDY6 225 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 GSTO2Q9H4Y5 243 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 MINDY3Q9H8M7 445 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 M0R3H8 397 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 ARSAP15289 507 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 RPL7P18124 248 aaKnown RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 SLC16A14Q7RTX9 510 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF551Q7Z340 670 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 SERINC5Q86VE9 423 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 CLECL1Q8IZS7 167 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 TMEM217Q8N7C4 229 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 PRAMEF11O60813 436 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 TBX10O75333 385 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 IGHV3-9P01782 118 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 NLRP8Q86W28 1048 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 NECTIN4Q96NY8 510 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 UBL7Q96S82 380 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 KCNJ15Q99712 375 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 SLC19A3Q9BZV2 496 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 MTHFD2LQ9H903 347 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 FRS3O43559 492 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 DPM1O60762 260 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 TAS2R30P59541 319 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 SNAPC3Q92966 411 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 PTPRMP28827 1452 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 F5H5P2 479 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 ESPNLQ6ZVH7 1005 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 IGSF21Q96ID5 467 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 MGLLQ99685 303 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 ATF6BQ99941 703 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 MTCH1Q9NZJ7 389 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 POLEQ07864 2286 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 EXOSC2Q13868 293 aaKnown RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 COL9A3Q14050 684 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 PIP5KL1Q5T9C9 394 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 LCTLQ6UWM7 567 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF705AQ6ZN79 300 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-201ENST00000356083 BAGE3Q86Y29 109 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 BAGE2Q86Y30 109 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 OR10X1Q8NGY0 326 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 A3GALT2U3KPV4 340 aa16.22■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF816-ZNF321PA0A0X1KG74 233 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF732B4DXR9 585 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 SLC22A2O15244 555 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF33AQ06730 810 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 KCNAB2Q13303 367 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF321PQ8N8H1 164 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 HCFC1R1Q9NWW0 138 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-201ENST00000356083 JAM2P57087 298 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 SLC46A3Q7Z3Q1 461 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 OCSTAMPQ9BR26 566 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 HOXD1Q9GZZ0 328 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 OBP2AQ9NY56 170 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 SIT1Q9Y3P8 196 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 NME7Q9Y5B8 376 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 GABRR3A8MPY1 467 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 HS3ST1O14792 307 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 PRPS1P60891 318 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 GK2Q14410 553 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-201ENST00000356083 SLC9A3R2Q15599 337 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 IL23AQ9NPF7 189 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 DENRO43583 198 aaKnown RBP16.21■□□□□ 0.19
COL27A1-201ENST00000356083 TXNDC12O95881 172 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 EMP3P54852 163 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 MTCP1P56278 107 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 MSMO1Q15800 293 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 B3GLCTQ6Y288 498 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 NAA40Q86UY6 237 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 OSTM1Q86WC4 334 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 PGAP3Q96FM1 320 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-201ENST00000356083 LMF2Q9BU23 707 aaKnown RBP16.21■□□□□ 0.19
COL27A1-201ENST00000356083 KIAA1456Q9P272 454 aa16.21■□□□□ 0.19
COL27A1-201ENST00000356083 LRRC10BA6NIK2 292 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 H3BMQ9 156 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 CLDN6P56747 220 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 VWA5B2Q8N398 1253 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 SURF4O15260 269 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 RAB33AQ14088 237 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 ZNF684Q5T5D7 378 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 RPL7L1Q6DKI1 246 aaKnown RBP16.21■□□□□ 0.18
COL27A1-201ENST00000356083 LPCAT3Q6P1A2 487 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 PPP1R3BQ86XI6 285 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 C2CD4AQ8NCU7 369 aaPredicted RBP16.21■□□□□ 0.18
COL27A1-201ENST00000356083 OR5AR1Q8NGP9 310 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 RBPJLQ9UBG7 517 aa16.21■□□□□ 0.18
COL27A1-201ENST00000356083 Q1RN00 199 aa16.2■□□□□ 0.18
COL27A1-201ENST00000356083 C18orf21Q32NC0 220 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms