RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 LCMT2O60294 686 aaKnown RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 IL1AP01583 271 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 GJA4P35212 333 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ITPRIPL2Q3MIP1 535 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ACSM3Q53FZ2 586 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF362Q5T0B9 420 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 AADACL4Q5VUY2 407 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 GLT8D1Q68CQ7 371 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 DUSP19Q8WTR2 217 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 DPH1Q9BZG8 443 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 NIPAL2Q9H841 368 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 KLHL9Q9P2J3 617 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 CCL27Q9Y4X3 112 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 RTTNQ86VV8 2226 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 F5H5P2 479 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 H0Y8X5 98 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF546Q86UE3 836 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 NRSN1Q8IZ57 195 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 C12orf45Q8N5I9 185 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 HRASLS5Q96KN8 279 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 LYSMD1Q96S90 227 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 EPYCQ99645 322 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 DUSP21Q9H596 190 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 MED20Q9H944 212 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 TMEM184CQ9NVA4 438 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 TMEM45AQ9NWC5 275 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 SPATA6Q9NWH7 488 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 TAAR2Q9P1P5 351 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 KLHL21Q9UJP4 597 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 PCDHGB1Q9Y5G3 927 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 TMPRSS11DO60235 418 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 DCNP07585 359 aaKnown RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 CD6P30203 668 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ETV1P50549 477 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 PIP5KL1Q5T9C9 394 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 LYPD8Q6UX82 237 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 KCTD20Q7Z5Y7 419 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 CCDC71Q8IV32 467 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 OR52E2Q8NGJ4 325 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 POTEKPQ9BYX7 375 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ATP13A2Q9NQ11 1180 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 USP36Q9P275 1121 aaKnown RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 ATXN7L1Q9ULK2 861 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-202ENST00000355815 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
SREBF1-202ENST00000355815 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 DUXAA6NLW8 204 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 GABRPO00591 440 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 TNFSF12O43508 249 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 HYAL3O43820 417 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 FADS1O60427 444 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ZFP36L2P47974 494 aaKnown RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 IRF4Q15306 451 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF784Q8NCA9 323 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 OR4K14Q8NGD5 310 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 TM9SF4Q92544 642 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 MYNNQ9NPC7 610 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 PRSS16Q9NQE7 514 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 KLHL42Q9P2K6 505 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ATG4BQ9Y4P1 393 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 TCRBP04435 133 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ARAFP10398 606 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 WNT3P56703 355 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ZXDCQ2QGD7 858 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 AMER3Q8N944 861 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 OR6T1Q8NGN1 323 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 TGIF2Q9GZN2 237 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 SLIRPQ9GZT3 109 aaKnown RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 MAN2C1Q9NTJ4 1040 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 B3GNT2Q9NY97 397 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 C11orf98E9PRG8 122 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 KHNYNO15037 678 aaKnown RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 C1QBP02746 253 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 HSD17B2P37059 387 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 LINC00471Q8N535 108 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 RELL2Q8NC24 303 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 CRB3Q9BUF7 120 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 NT5DC2Q9H857 520 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 SLC52A3Q9NQ40 469 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 CXCL10P02778 98 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 PCSK2P16519 638 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-202ENST00000355815 RAB6AP20340 208 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 RORAP35398 523 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 TAS2R43P59537 309 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 SHC2P98077 582 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF584Q8IVC4 421 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 TTLQ8NG68 377 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 TM4SF18Q96CE8 201 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 LAMP5Q9UJQ1 280 aa13.13□□□□□ -0.31
SREBF1-202ENST00000355815 ZNF670-ZNF695F2Z2N8 137 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 FBXO24O75426 580 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.317e-10■■■□□ 19.1
SREBF1-202ENST00000355815 DLSTP36957 453 aa13.12□□□□□ -0.31
SREBF1-202ENST00000355815 ART1P52961 327 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms