RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SBK2P0C263 348 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 NOS3P29474 1203 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 ACTC1P68032 377 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 ACTA1P68133 377 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 RIN1Q13671 783 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 FAM53BQ14153 422 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 FGFBP1Q14512 234 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 COL13A1Q5TAT6 717 aaPredicted RBP20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 LCN1P1Q5VSP4 162 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 CNIH2Q6PI25 160 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 ZC3H14Q6PJT7 736 aaKnown RBP20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 PTCHD1Q96NR3 888 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 DEPDC7Q96QD5 511 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 Q9N2J8 555 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 NDRG2Q9UN36 371 aaKnown RBP20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 PCDHGB7Q9Y5F8 929 aa20.53■□□□□ 0.88
NKX2-1-201ENST00000354822 PLPP2O43688 288 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 HPGDSO60760 199 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 PRAMEF2O60811 474 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 REM1O75628 298 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 POU3F3P20264 500 aaPredicted RBP20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 IGFBP4P22692 258 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 SLC2A5P22732 501 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 SLC16A1P53985 500 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 GAS6Q14393 721 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 RSBN1Q5VWQ0 802 aaPredicted RBP20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 DGAT2Q96PD7 388 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 TNFRSF13CQ96RJ3 184 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 PRTFDC1Q9NRG1 225 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 RPS6KB2Q9UBS0 482 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 XIRP2A4UGR9 3374 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 C2orf92A0A1B0GVN3 265 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 ZC3H12DA2A288 527 aaKnown RBP20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 B4DGG1 531 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 IGKV1D-16P01601 117 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 HLA-DQB1P01920 261 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 TRAPPC2P0DI81 140 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 TRAPPC2BP0DI82 140 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 ATP12AP54707 1039 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 RDH10Q8IZV5 341 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 C19orf18Q8NEA5 215 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 OR4N2Q8NGD1 307 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 OR6C4Q8NGE1 309 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 TBX5Q99593 518 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 SERTAD3Q9UJW9 196 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF221Q9UK13 617 aa20.52■□□□□ 0.88
NKX2-1-201ENST00000354822 BRWD1Q9NSI6 2320 aa20.52■□□□□ 0.87
NKX2-1-201ENST00000354822 SHISA3A0PJX4 238 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 CCDC85CA6NKD9 419 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 NPIPB9F8W1W9 429 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 FOXS1O43638 330 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 NSA2O95478 260 aaKnown RBP20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 CTSBP07858 339 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 SLC2A2P11168 524 aaPredicted RBP20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 PEX11GQ96HA9 241 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 LRRC61Q9BV99 259 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 C11orf54Q9H0W9 315 aaPredicted RBP20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 ADGRL4Q9HBW9 690 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 HCN3Q9P1Z3 774 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 LINC00854A0A1B0GVQ3 168 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 EFCAB7A8K855 629 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 PPP1R3DO95685 299 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 SSTR4P31391 388 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 GPR143P51810 404 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 CRMP1Q14194 572 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 TRIQKQ629K1 86 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 Q8N402 240 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 RCBTB1Q8NDN9 531 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 OR6F1Q8NGZ6 308 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 KCTD12Q96CX2 325 aaKnown RBP20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 ART5Q96L15 291 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 RNF32Q9H0A6 362 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 UCK1Q9HA47 277 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 POU2F3Q9UKI9 436 aa20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 SIRT4Q9Y6E7 314 aaPredicted RBP20.51■□□□□ 0.87
NKX2-1-201ENST00000354822 MEIOCA2RUB1 952 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 MBTPS2O43462 519 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 CRYZQ08257 329 aaKnown RBP20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 INSL4Q14641 139 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 Q6ZS52 159 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 SMPDL3BQ92485 455 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 CTRCQ99895 268 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 RBCK1Q9BYM8 510 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 MCCC2Q9HCC0 563 aa20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 MKKSQ9NPJ1 570 aaPredicted RBP20.5■□□□□ 0.87
NKX2-1-201ENST00000354822 HRO43593 1189 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 NCR1O76036 304 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 APEX1P27695 318 aaKnown RBP20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 FASLGP48023 281 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 BIKQ13323 160 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 ZNF267Q14586 743 aaPredicted RBP20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 ELOCQ15369 112 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 TPRA1Q86W33 373 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 PHOX2BQ99453 314 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 KLHL21Q9UJP4 597 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 NOX1Q9Y5S8 564 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 TGFBR3LH3BV60 316 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 ADAM11O75078 769 aa20.49■□□□□ 0.87
NKX2-1-201ENST00000354822 PPM1BO75688 479 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms