RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SNED1Q8TER0 1413 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CTTNBP2Q8WZ74 1663 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 A0A1B0GTQ1 180 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 IGLON5A6NGN9 336 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FAM25EA8MYX2 175 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 EI24O14681 340 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR2J3O76001 311 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PDE5AO76074 875 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 NXPH4O95158 308 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TSPAN12O95859 305 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TGM6O95932 706 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 HPP00738 406 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SLC2A3P11169 496 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PDHA2P29803 388 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 QARSP47897 775 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ZFP36L2P47974 494 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 HOXA1P49639 335 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ABCE1P61221 599 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR2G6Q5TZ20 316 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 LEG1Q6P5S2 330 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ATRAIDQ6UW56 229 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 VITQ6UXI7 678 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 C9orf47Q6ZRZ4 202 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 Q6ZSR3 168 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR4D9Q8NGE8 314 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR52B6Q8NGF0 335 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR5AP2Q8NGF4 316 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR4A15Q8NGL6 344 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR10G8Q8NGN5 311 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR9A1PQ8NGU1 263 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FBXO25Q8TCJ0 367 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ZBTB9Q96C00 473 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF300Q96RE9 604 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TBX15Q96SF7 602 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CYP2S1Q96SQ9 504 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 COPS8Q99627 209 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 NKX3-1Q99801 234 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DPH7Q9BTV6 452 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SPATA16Q9BXB7 569 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GPR174Q9BXC1 333 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FBXO44Q9H4M3 255 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 NARFLQ9H6Q4 476 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM185BQ9H7F4 350 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 POPDC2Q9HBU9 364 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF221Q9UK13 617 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CFAP45Q9UL16 551 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PCDHGB1Q9Y5G3 927 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TNIKQ9UKE5 1360 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 LOC100653049A0A140TA62 436 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 A0A1W2PPE3 182 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SMIM1B2RUZ4 78 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GFYI3L273 518 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 K7EQG2 157 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 P2RY10O00398 339 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CCSO14618 274 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 MSH4O15457 936 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 BUB3O43684 328 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 KRT34O76011 436 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 KRT36O76013 467 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SORBS2O94875 1100 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SCELO95171 688 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 IGHV3-9P01782 118 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PRSS56P0CW18 603 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 RBMY1CP0DJD4 496 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FOSL2P15408 326 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GNB3P16520 340 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 MX1P20591 662 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GCAP28676 217 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CASP14P31944 242 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 UGT1A5P35504 534 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PGFP49763 221 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 BCAP31P51572 246 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ART1P52961 327 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CDH6P55285 790 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 NANOS3P60323 173 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CD300CQ08708 224 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GAGE5Q13069 117 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GAGE6Q13070 117 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SELENBP1Q13228 472 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GRB7Q14451 532 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TAB1Q15750 504 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ISXQ2M1V0 245 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SGSM1Q2NKQ1 1148 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SFT2D3Q587I9 215 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SLC8B1Q6J4K2 584 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ENPP6Q6UWR7 440 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ANGPTL8Q6UXH0 198 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 EIF3MQ7L2H7 374 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 KIR3DL3Q8N743 410 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR10V1Q8NGI7 309 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 RFESDQ8TAC1 157 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FAM81AQ8TBF8 368 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ADAMTS16Q8TE57 1224 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PCNPQ8WW12 178 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PINX1Q96BK5 328 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TM2D1Q9BX74 207 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DGCR6LQ9BY27 220 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DUSP16Q9BY84 665 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FAM49AQ9H0Q0 323 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SYNDIG1Q9H7V2 258 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms