RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SLC16A11Q8NCK7 471 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ZNF540Q8NDQ6 660 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 C7orf57Q8NEG2 295 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 OR5T3Q8NGG3 340 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 OR6T1Q8NGN1 323 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 OR52P1PQ8NH57 321 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 TRUB1Q8WWH5 349 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 SGCDQ92629 289 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 RORBQ92753 470 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 SLC38A4Q969I6 547 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 GTPBP3Q969Y2 492 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 OTUB1Q96FW1 271 aaPredicted RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 C18orf12Q96KH6 178 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 SDF2Q99470 211 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 SLC38A3Q99624 504 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 MAP3K3Q99759 626 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 WFDC6Q9BQY6 131 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 PELOQ9BRX2 385 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 LMF2Q9BU23 707 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 GPR87Q9BY21 358 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ZNF552Q9H707 407 aaPredicted RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 IMPAD1Q9NX62 359 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ZNF226Q9NYT6 803 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 SEMA5BQ9P283 1151 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ERVK-18Q9QC07 812 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 RHCGQ9UBD6 479 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 KLHL3Q9UH77 587 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ENPP5Q9UJA9 477 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 WDR45Q9Y484 360 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 CHST2Q9Y4C5 530 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 NUP210LQ5VU65 1888 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 SCN3AQ9NY46 2000 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 EFCAB10A6NFE3 127 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 PTGES3LE9PB15 166 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 H0YIG0 161 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 SGK494L7N484 410 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 MASP2O00187 686 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 CCL21O00585 134 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 HCRTR1O43613 425 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 FOXS1O43638 330 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 CTNSO60931 367 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 LDB3O75112 727 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 NME6O75414 186 aaPredicted RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 STX11O75558 287 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 TP53P04637 393 aaPredicted RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 CDK1P06493 297 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 DBIP07108 87 aaKnown RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 MSL3P1P0C860 447 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 FGF5P12034 268 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 NID1P14543 1247 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 IGFBP2P18065 325 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 CCNA2P20248 432 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 NT5EP21589 574 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 CA7P43166 264 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 SLC15A1P46059 708 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 GSSP48637 474 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 EEF1A1P68104 462 aaKnown RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 ATP1A4Q13733 1029 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 IRF3Q14653 427 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 TRAM2Q15035 370 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 SMN1Q16637 294 aaKnown RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 DECR1Q16698 335 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 ZSWIM7Q19AV6 140 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 DEFB110Q30KQ9 67 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 TRMT12Q53H54 448 aaKnown RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 DCST2Q5T1A1 773 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 LCN10Q6JVE6 187 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 ZNF836Q6ZNA1 936 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 Q6ZPB1 254 aaPredicted RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 SLC16A12Q6ZSM3 486 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 MRGPREQ86SM8 312 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 VRK2Q86Y07 508 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 KRTAP1-3Q8IUG1 177 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 OR4N5Q8IXE1 308 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 VWA5B2Q8N398 1253 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 OR4K5Q8NGD3 323 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 OR9A4Q8NGU2 314 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 GNPDA2Q8TDQ7 276 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 OIT3Q8WWZ8 545 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 SLC9A6Q92581 669 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 SLC35B4Q969S0 331 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 YIPF6Q96EC8 236 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 ZDHHC12Q96GR4 267 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 OR6C1Q96RD1 312 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 COPS4Q9BT78 406 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 ANKRA2Q9H9E1 313 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 SLC25A19Q9HC21 320 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 PDE7BQ9NP56 450 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 ACOT13Q9NPJ3 140 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 ZNF232Q9UNY5 417 aa7.54□□□□□ -1.2
CD44-205ENST00000352818 NCOA6Q14686 2063 aaPredicted RBP7.54□□□□□ -1.2
CD44-205ENST00000352818 HRNRQ86YZ3 2850 aaPredicted RBP7.53□□□□□ -1.2
CD44-205ENST00000352818 TRGV8A0A0C4DH27 118 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 SYNDIG1LA6NDD5 238 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CLDN24A6NM45 220 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 FAM227AF5H4B4 570 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 H3BMH7 237 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 CLDN4O14493 209 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 AP3D1O14617 1153 aa7.53□□□□□ -1.2
CD44-205ENST00000352818 SLC22A1O15245 554 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms