RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 OR4C6Q8NH72 309 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 OTULINQ96BN8 352 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 ZNF304Q9HCX3 659 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 TXNL4BQ9NX01 149 aaKnown RBP15.36■□□□□ 0.05
SAMM50-201ENST00000350028 ERVK13-1Q9NX77 482 aa15.36■□□□□ 0.05
SAMM50-201ENST00000350028 SF3B6Q9Y3B4 125 aaKnown RBP15.36■□□□□ 0.05
SAMM50-201ENST00000350028 ISPDA4D126 451 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 HTR3EA5X5Y0 456 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 FAM183AA6NL82 134 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 RIIAD1A6NNX1 92 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 J3QRE1 110 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 PPM1BO75688 479 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 IL33O95760 270 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 IL1AP01583 271 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 DCNP07585 359 aaKnown RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 HK1P19367 917 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 FBLP22087 321 aaKnown RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 PAICSP22234 425 aaKnown RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 COPZ1P61923 177 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 DMWDQ09019 674 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 PERM1Q5SV97 790 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 SLC35F1Q5T1Q4 408 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 OR51A7Q8NH64 312 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 ARSGQ96EG1 525 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 SGTBQ96EQ0 304 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 TRMT61AQ96FX7 289 aaKnown RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 TNFRSF13CQ96RJ3 184 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 SECISBP2Q96T21 854 aaKnown RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 ELF4Q99607 663 aaPredicted RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 ZNF649Q9BS31 505 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 UBQLN4Q9NRR5 601 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 DHCR7Q9UBM7 475 aaKnown RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 MRTO4Q9UKD2 239 aaKnown RBP15.35■□□□□ 0.05
SAMM50-201ENST00000350028 UGT2A1Q9Y4X1 527 aa15.35■□□□□ 0.05
SAMM50-201ENST00000350028 TRAV27A0A087WT01 109 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 A0A087WUJ7 227 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 SLC22A31A6NKX4 558 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 UPK1BO75841 260 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 NGFRP08138 427 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 PEPDP12955 493 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 FOLR1P15328 257 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 LCN1P31025 176 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 GABRA5P31644 462 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 CSF2RBP32927 897 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 ARRB1P49407 418 aaPredicted RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 DCAF7P61962 342 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 CRYZQ08257 329 aaKnown RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 ELAVL1Q15717 326 aaKnown RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 ZNF181Q2M3W8 571 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 GATAD2AQ86YP4 633 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 NACC2Q96BF6 587 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 C1GALT1C1Q96EU7 318 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 ART5Q96L15 291 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 MUTYHQ9UIF7 546 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 GSTK1Q9Y2Q3 226 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 CAB39Q9Y376 341 aaPredicted RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 CLCA3PQ9Y6N3 262 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 FRG2CA6NGY1 282 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 A8MUA0 341 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 AKAP8O43823 692 aaKnown RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 IFNGP01579 166 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 SLC9A3P48764 834 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 RPS25P62851 125 aaKnown RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 SHBQ15464 509 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 ARHGAP11AQ6P4F7 1023 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 TMPRSS11AQ6ZMR5 421 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 ACBD7Q8N6N7 88 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 SLC37A3Q8NCC5 494 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 FAM71CQ8NEG0 241 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 OR51G2Q8NGK0 314 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 PTP4A1Q93096 173 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 TSLPQ969D9 159 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 EFHD2Q96C19 240 aaPredicted RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 LCORQ96JN0 433 aaPredicted RBP15.34■□□□□ 0.05
SAMM50-201ENST00000350028 COQ7Q99807 217 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 KCNS3Q9BQ31 491 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 MED18Q9BUE0 208 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 MCCC2Q9HCC0 563 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 SMURF1Q9HCE7 757 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 INPP5EQ9NRR6 644 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 SNTG1Q9NSN8 517 aa15.34■□□□□ 0.05
SAMM50-201ENST00000350028 TRDV1A0A1B0GX56 115 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 TCRBV16S1A1N1A0A5B0 115 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 SYNDIG1LA6NDD5 238 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 A8MU76 341 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 LOC110117498-PIK3R3F6TDL0 507 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 PLD2O14939 933 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 NDUFB2O95178 105 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 PPP1R3DO95685 299 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 IGKV3-11P04433 115 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 HPGDP15428 266 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF3P17036 446 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 FGF9P31371 208 aaPredicted RBP15.33■□□□□ 0.04
SAMM50-201ENST00000350028 CD79BP40259 229 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 BDH1Q02338 343 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 RUNX1T1Q06455 604 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 NDUFAF6Q330K2 333 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 CRTC2Q53ET0 693 aaPredicted RBP15.33■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF362Q5T0B9 420 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms