RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 NTF4P34130 210 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 GPC1P35052 558 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 FOXG1P55316 489 aaPredicted RBP13.73□□□□□ -0.21
COPE-202ENST00000349893 SNRPD2P62316 118 aaKnown RBP13.73□□□□□ -0.21
COPE-202ENST00000349893 SPDYAQ5MJ70 313 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.73□□□□□ -0.21
COPE-202ENST00000349893 NOXRED1Q6NXP6 359 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 TRIM46Q7Z4K8 759 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 COX18Q8N8Q8 333 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 LINC01356Q8N9X3 169 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 ZNF527Q8NB42 609 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 FBXO17Q96EF6 278 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 C16orf58Q96GQ5 468 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 KCNA7Q96RP8 456 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 STACQ99469 402 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 HOXD1Q9GZZ0 328 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 IQCGQ9H095 443 aaKnown RBP13.73□□□□□ -0.21
COPE-202ENST00000349893 AMDHD2Q9Y303 409 aa13.73□□□□□ -0.21
COPE-202ENST00000349893 UTP11Q9Y3A2 253 aaKnown RBP13.73□□□□□ -0.21
COPE-202ENST00000349893 POLR3HQ9Y535 204 aaPredicted RBP13.73□□□□□ -0.21
COPE-202ENST00000349893 LRP5LA4QPB2 252 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 LILRA1O75019 489 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 RSL1D1O76021 490 aaKnown RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 IGHV3-9P01782 118 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 IMPDH1P20839 514 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 IL2RGP31785 369 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 DIO1P49895 249 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 CHN2P52757 468 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 SLC16A1P53985 500 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 PRKAG1P54619 331 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 CDH15P55291 814 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 POU6F2P78424 691 aaPredicted RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 SLC25A3Q00325 362 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 KIAA0040Q15053 153 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 PRR31Q5SQ13 230 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 TMPPEQ6ZT21 453 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 MTDHQ86UE4 582 aaKnown RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 UBE2J2Q8N2K1 259 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 OR5W2Q8NH69 310 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 ZFP28Q8NHY6 868 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 CIDECQ96AQ7 238 aaPredicted RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 BOD1Q96IK1 185 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 METTL2AQ96IZ6 378 aaKnown RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 OR5B2Q96R09 309 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 NAPGQ99747 312 aaPredicted RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 C1QTNF6Q9BXI9 259 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 ANKZF1Q9H8Y5 726 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 SLC17A5Q9NRA2 495 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 ACSS1Q9NUB1 689 aaPredicted RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 DCTN4Q9UJW0 460 aa13.72□□□□□ -0.21
COPE-202ENST00000349893 NOSIPQ9Y314 301 aaKnown RBP13.72□□□□□ -0.21
COPE-202ENST00000349893 FAM157AC9JC47 383 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 H3BNH8 94 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 PDE5AO76074 875 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 STAMBPO95630 424 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 PHBP35232 272 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 PPOXP50336 477 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 SERPINB9P50453 376 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 DVL1P1P54792 670 aaPredicted RBP13.71□□□□□ -0.21
COPE-202ENST00000349893 FOXA1P55317 472 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 CSNK2A1P68400 391 aaPredicted RBP13.71□□□□□ -0.21
COPE-202ENST00000349893 QPRTQ15274 297 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 ZNF385BQ569K4 471 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 UGT2A3Q6UWM9 527 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 LRIG3Q6UXM1 1119 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 C3orf56Q8N813 242 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 ANKS4BQ8N8V4 417 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 FAM216AQ8WUB2 273 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 ARL8AQ96BM9 186 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 L3HYPDHQ96EM0 354 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 PIGUQ9H490 435 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 CCL27Q9Y4X3 112 aa13.71□□□□□ -0.21
COPE-202ENST00000349893 B9A039 149 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 GPR171O14626 319 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 EIF4E2O60573 245 aaKnown RBP13.7□□□□□ -0.22
COPE-202ENST00000349893 INHBAP08476 426 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 TAC1P20366 129 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 PCMT1P22061 227 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 SERPINF1P36955 418 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 PRKAA2P54646 552 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 PDE7AQ13946 482 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 EFNB3Q15768 340 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 CARTPTQ16568 116 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 NDUFAF6Q330K2 333 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 TIGD2Q4W5G0 525 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 PDLIM3Q53GG5 364 aaPredicted RBP13.7□□□□□ -0.22
COPE-202ENST00000349893 RELL1Q8IUW5 271 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
COPE-202ENST00000349893 ST8SIA1Q92185 356 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 CDS1Q92903 461 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 OTUB1Q96FW1 271 aaPredicted RBP13.7□□□□□ -0.22
COPE-202ENST00000349893 PAFAH2Q99487 392 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 RAB17Q9H0T7 212 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 PLK3Q9H4B4 646 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 ZNF180Q9UJW8 692 aa13.7□□□□□ -0.22
COPE-202ENST00000349893 MOKQ9UQ07 419 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms