RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 TMEM9BQ9NQ34 198 aa12.37□□□□□ -0.43
UBA3-201ENST00000349511 SSR3Q9UNL2 185 aa12.37□□□□□ -0.43
UBA3-201ENST00000349511 CHST2Q9Y4C5 530 aa12.37□□□□□ -0.43
UBA3-201ENST00000349511 PCNX2A6NKB5 2137 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 PMS2P1A4D2B8 440 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 AP3D1O14617 1153 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 MYL12BO14950 172 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 TLX2O43763 284 aaPredicted RBP12.36□□□□□ -0.43
UBA3-201ENST00000349511 UGT2B17O75795 530 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 ZGLP1P0C6A0 271 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 SMIM11AP58511 58 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 DCDP81605 110 aaKnown RBP12.36□□□□□ -0.43
UBA3-201ENST00000349511 TCF15Q12870 199 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 ZNF79Q15937 498 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 MAPK14Q16539 360 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 YOD1Q5VVQ6 348 aaPredicted RBP12.36□□□□□ -0.43
UBA3-201ENST00000349511 LIPKQ5VXJ0 399 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 NXNL2Q5VZ03 156 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 PODNL1Q6PEZ8 512 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 NPSR1Q6W5P4 371 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 PHC2Q8IXK0 858 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 ZNF614Q8N883 585 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 BMPERQ8N8U9 685 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 OR52I1Q8NGK6 324 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 RASSF5Q8WWW0 418 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 VSTM2LQ96N03 204 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 WDFY2Q96P53 400 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 LMF1Q96S06 567 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 MKKSQ9NPJ1 570 aaPredicted RBP12.36□□□□□ -0.43
UBA3-201ENST00000349511 DUSP22Q9NRW4 184 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 GRIP1Q9Y3R0 1128 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 CMAHPQ9Y471 501 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 MMACHCQ9Y4U1 282 aa12.36□□□□□ -0.43
UBA3-201ENST00000349511 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
UBA3-201ENST00000349511 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 CDC14CA4D256 554 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 SLC35F4A4IF30 521 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 CDRT1O95170 752 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 AGR2O95994 175 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 IGKV1D-16P01601 117 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 CLPSP04118 112 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 KRT8P05787 483 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 GP1BAP07359 652 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 AZGP1P25311 298 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 MAP3K8P41279 467 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 RFX2P48378 723 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 POU6F2P78424 691 aaPredicted RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 ALDH6A1Q02252 535 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 MXD1Q05195 221 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 RUNX1T1Q06455 604 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 FUT7Q11130 342 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 GPR50Q13585 617 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 C1DQ13901 141 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 LARS2Q15031 903 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 ZNF615Q8N8J6 731 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 OR9Q1Q8NGQ5 310 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 OR6F1Q8NGZ6 308 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 SPATA5L1Q9BVQ7 753 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 POLDIP3Q9BY77 421 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 SRRQ9GZT4 340 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 TPK1Q9H3S4 243 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 PARD6AQ9NPB6 346 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 KCNE5Q9UJ90 142 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 ZNF221Q9UK13 617 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 RIF1Q5UIP0 2472 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 TCRBV16S1A1N1A0A5B0 115 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 MEN1O00255 615 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 PRAMEF2O60811 474 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 STX11O75558 287 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 NKX2-2O95096 273 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 TCEA1P23193 301 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 MMP11P24347 488 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 GINS1Q14691 196 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 ZNHIT3Q15649 155 aaPredicted RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 EXOSC6Q5RKV6 272 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 ARMC4Q5T2S8 1044 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 ZER1Q7Z7L7 766 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 SLC2A12Q8TD20 617 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 PHOX2BQ99453 314 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 STACQ99469 402 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 COL25A1Q9BXS0 654 aaPredicted RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 ZNF350Q9GZX5 532 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 MTHFD2LQ9H903 347 aaPredicted RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 TIGARQ9NQ88 270 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 TXNL4BQ9NX01 149 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 CALML5Q9NZT1 146 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 DIMT1Q9UNQ2 313 aaKnown RBP12.35□□□□□ -0.43
UBA3-201ENST00000349511 NUP210LQ5VU65 1888 aa12.35□□□□□ -0.43
UBA3-201ENST00000349511 IQCMA0A1B0GVH7 501 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 IDSB3KWA1 339 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 PLD2O14939 933 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 RAB36O95755 333 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 LGI1O95970 557 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 CT45A8P0DMV1 189 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 CT45A9P0DMV2 189 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 FGF5P12034 268 aa12.34□□□□□ -0.43
UBA3-201ENST00000349511 IL7P13232 177 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms