RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ME2P23368 584 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 OPRM1P35372 400 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 SLC6A8P48029 635 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 EEF1A1P68104 462 aaKnown RBP19.84■□□□□ 0.77
SNX3-202ENST00000349379 PON3Q15166 354 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 LIN52Q52LA3 116 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 COQ5Q5HYK3 327 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 GCNT6Q5T4J0 391 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 RNF220Q5VTB9 566 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 ZNF836Q6ZNA1 936 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 VRK2Q86Y07 508 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 LILRA2Q8N149 483 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 FNDC9Q8TBE3 224 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 RNF122Q9H9V4 155 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 JKAMPQ9P055 326 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 EVPLLA8MZ36 301 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 TNFSF13O75888 250 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 PGM3O95394 542 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 CRHP06850 196 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 EIF1AXP47813 144 aaKnown RBP19.83■□□□□ 0.77
SNX3-202ENST00000349379 ASCL1P50553 236 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 ADRM1Q16186 407 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 OR2A2Q6IF42 318 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 PLEKHM3Q6ZWE6 761 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 P4HA3Q7Z4N8 544 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 BBS10Q8TAM1 723 aa19.83■□□□□ 0.77
SNX3-202ENST00000349379 INTS12Q96CB8 462 aaKnown RBP19.83■□□□□ 0.77
SNX3-202ENST00000349379 ZNF443Q9Y2A4 671 aaPredicted RBP19.83■□□□□ 0.77
SNX3-202ENST00000349379 TNFSF11O14788 317 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 SLC22A2O15244 555 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 OPN1LWP04000 364 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 ETS2P15036 469 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 SFTPDP35247 375 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 NFYCQ13952 458 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 SELPLGQ14242 412 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 GUSBP1Q15486 140 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 SGCBQ16585 318 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 ZSWIM7Q19AV6 140 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 GCNT2Q8N0V5 402 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 MARVELD3Q96A59 401 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 CCDC106Q9BWC9 280 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 COQ10BQ9H8M1 238 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 RLIMQ9NVW2 624 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 IFT52Q9Y366 437 aa19.82■□□□□ 0.76
SNX3-202ENST00000349379 CELSR2Q9HCU4 2923 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 A0A1W2PNV4 684 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 GJE1A6NN92 205 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 BBIP1A8MTZ0 92 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 FXYD1O00168 92 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 AP3D1O14617 1153 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 CXCL13O43927 109 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 AQP8O94778 261 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 PABPC4LP0CB38 370 aaKnown RBP19.81■□□□□ 0.76
SNX3-202ENST00000349379 FCGR2AP12318 317 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 COX6B1P14854 86 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 RYKP34925 604 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 AGFG1P52594 562 aaKnown RBP19.81■□□□□ 0.76
SNX3-202ENST00000349379 SEC24CP53992 1094 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 CDK6Q00534 326 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 EPS8Q12929 822 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 LARS2Q15031 903 aaKnown RBP19.81■□□□□ 0.76
SNX3-202ENST00000349379 MAPRE2Q15555 327 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 TRMT5Q32P41 509 aaKnown RBP19.81■□□□□ 0.76
SNX3-202ENST00000349379 EEF1A1P5Q5VTE0 462 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 HBMQ6B0K9 141 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 C3orf33Q6P1S2 294 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 GRINAQ7Z429 371 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 ZNF440Q8IYI8 595 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 NFKBIDQ8NI38 313 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 SPATA9Q9BWV2 254 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 RSPO3Q9BXY4 272 aaPredicted RBP19.81■□□□□ 0.76
SNX3-202ENST00000349379 TRIM8Q9BZR9 551 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 PRDM4Q9UKN5 801 aa19.81■□□□□ 0.76
SNX3-202ENST00000349379 CFAP73A6NFT4 308 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 SYT5O00445 386 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 LSP1P33241 339 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 APOBEC1P41238 236 aaKnown RBP19.8■□□□□ 0.76
SNX3-202ENST00000349379 ACAA2P42765 397 aaKnown RBP19.8■□□□□ 0.76
SNX3-202ENST00000349379 MTPNP58546 118 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 MERTKQ12866 999 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 TMEM176BQ3YBM2 270 aaPredicted RBP19.8■□□□□ 0.76
SNX3-202ENST00000349379 PDSS1Q5T2R2 415 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 REP15Q6BDI9 236 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 REEP3Q6NUK4 255 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 NET1Q7Z628 596 aaPredicted RBP19.8■□□□□ 0.76
SNX3-202ENST00000349379 PTOV1Q86YD1 416 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 DMRTC2Q8IXT2 367 aaPredicted RBP19.8■□□□□ 0.76
SNX3-202ENST00000349379 CLIP4Q8N3C7 705 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 ZNF563Q8TA94 476 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 OSTF1Q92882 214 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 SLC35B4Q969S0 331 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 KAT8Q9H7Z6 458 aaKnown RBP19.8■□□□□ 0.76
SNX3-202ENST00000349379 CAPN7Q9Y6W3 813 aa19.8■□□□□ 0.76
SNX3-202ENST00000349379 C5orf58C9J3I9 102 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 KIR2DL2P43627 348 aaPredicted RBP19.79■□□□□ 0.76
SNX3-202ENST00000349379 IDH2P48735 452 aaKnown RBP19.79■□□□□ 0.76
SNX3-202ENST00000349379 SCARB2Q14108 478 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 ZNF239Q16600 458 aaKnown RBP19.79■□□□□ 0.76
SNX3-202ENST00000349379 MEX3BQ6ZN04 569 aaKnown RBP19.79■□□□□ 0.76
SNX3-202ENST00000349379 SNX32Q86XE0 403 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms