RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ABRACLQ9P1F3 81 aa13.22□□□□□ -0.29
RLIM-202ENST00000349225 FBXL4Q9UKA2 621 aa13.22□□□□□ -0.29
RLIM-202ENST00000349225 CDHR4A6H8M9 788 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 ZNF840PA6NDX5 716 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 GOSR2O14653 212 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 CRYBA1P05813 215 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 RPS11P62280 158 aaKnown RBP eCLIP13.21□□□□□ -0.29
RLIM-202ENST00000349225 DCDP81605 110 aaKnown RBP13.21□□□□□ -0.29
RLIM-202ENST00000349225 SRSF3P84103 164 aaKnown RBP13.21□□□□□ -0.29
RLIM-202ENST00000349225 LGALS3BPQ08380 585 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 NRMQ8IXM6 262 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 CAMKVQ8NCB2 501 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 EXOSC8Q96B26 276 aaKnown RBP13.21□□□□□ -0.29
RLIM-202ENST00000349225 PEX11GQ96HA9 241 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 ZNF75AQ96N20 296 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 CRB3Q9BUF7 120 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 FAM117AQ9C073 453 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 UBQLN3Q9H347 655 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 FN3KQ9H479 309 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 P2RX2Q9UBL9 471 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 EPHA6Q9UF33 1036 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 ST6GALNAC2Q9UJ37 374 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 PCOLCE2Q9UKZ9 415 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 TMEM200CA6NKL6 621 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 SNRPGP15A8MWD9 76 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 FAM25EA8MYX2 175 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 BNIP3LO60238 219 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 NDUFB6O95139 128 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 GP1BAP07359 652 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 C1GALT1C1LP0DN25 315 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 ALPPL2P10696 532 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 TYRP1P17643 537 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 SPINT3P49223 89 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 HCCSP53701 268 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 CLDN12P56749 244 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
RLIM-202ENST00000349225 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 PRAMEF13Q5VWM6 474 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 OLFML2AQ68BL7 652 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 HAGHLQ6PII5 290 aaPredicted RBP13.21□□□□□ -0.29
RLIM-202ENST00000349225 MFFQ9GZY8 342 aa13.21□□□□□ -0.29
RLIM-202ENST00000349225 NUMA1Q14980 2115 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 SOCS5O75159 536 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 IL5P05113 134 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 PVALBP20472 110 aaPredicted RBP13.21□□□□□ -0.3
RLIM-202ENST00000349225 CNR1P21554 472 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 MAT2AP31153 395 aaKnown RBP13.21□□□□□ -0.3
RLIM-202ENST00000349225 FRKP42685 505 aaPredicted RBP13.21□□□□□ -0.3
RLIM-202ENST00000349225 CAPZA2P47755 286 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 GCGRP47871 477 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 CCL14Q16627 93 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 UBE2NLQ5JXB2 153 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 MUC20Q8N307 709 aaPredicted RBP13.21□□□□□ -0.3
RLIM-202ENST00000349225 AMER3Q8N944 861 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 CHST14Q8NCH0 376 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 OSTF1Q92882 214 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 INTS12Q96CB8 462 aaKnown RBP13.21□□□□□ -0.3
RLIM-202ENST00000349225 WDR34Q96EX3 536 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 TRPC4Q9UBN4 977 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 ZNF230Q9UIE0 474 aaPredicted RBP13.21□□□□□ -0.3
RLIM-202ENST00000349225 OR10H1Q9Y4A9 318 aa13.21□□□□□ -0.3
RLIM-202ENST00000349225 DISC1C4P0D8 188 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 GABARAPH6UMI1 98 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 SGCEO43556 437 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 MAGEB1P43366 347 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 HES5Q5TA89 166 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 MEPCEQ7L2J0 689 aaKnown RBP13.2□□□□□ -0.3
RLIM-202ENST00000349225 ADCK2Q7Z695 626 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
RLIM-202ENST00000349225 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 LILRB2Q8N423 598 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 TEX19Q8NA77 164 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 TSNAXQ99598 290 aaKnown RBP13.2□□□□□ -0.3
RLIM-202ENST00000349225 MED17Q9NVC6 651 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 DHCR7Q9UBM7 475 aaKnown RBP13.2□□□□□ -0.3
RLIM-202ENST00000349225 TRAV1-2A0A0B4J238 106 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 NEDD8-MDP1E9PL57 170 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
RLIM-202ENST00000349225 RPA2P15927 270 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 NT5EP21589 574 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 FPR3P25089 353 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 EIF1P41567 113 aaKnown RBP13.2□□□□□ -0.3
RLIM-202ENST00000349225 DLX5P56178 289 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 LHX9Q9NQ69 397 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
RLIM-202ENST00000349225 DTX4Q9Y2E6 619 aa13.2□□□□□ -0.3
RLIM-202ENST00000349225 SULT1C2O00338 296 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 KHDRBS3O75525 346 aaKnown RBP13.19□□□□□ -0.3
RLIM-202ENST00000349225 SERPINA3P01011 423 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 MT-ND5P03915 603 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 ACADLP28330 430 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 PYCR1P32322 319 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 P2RX1P51575 399 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 ART1P52961 327 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 SWI5Q1ZZU3 235 aa13.19□□□□□ -0.3
RLIM-202ENST00000349225 FCRLBQ6BAA4 426 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms