RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ASB4Q9Y574 426 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 BACE2Q9Y5Z0 518 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 ALPK3Q96L96 1907 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 WDPCPO95876 746 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 CATP04040 527 aaKnown RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 SAGP10523 405 aaPredicted RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 RPL3P39023 403 aaKnown RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 PCBP3P57721 371 aaKnown RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 SMAD3P84022 425 aaKnown RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 C21orf62-AS1Q17RA5 79 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 RTP2Q5QGT7 225 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 H3F3CQ6NXT2 135 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 TMEM71Q6P5X7 295 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 ZNF546Q86UE3 836 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 LNX2Q8N448 690 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 RFLNBQ8N5W9 214 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 GOT1L1Q8NHS2 421 aaPredicted RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 C2orf15Q8WU43 125 aaKnown RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 TMEM255BQ8WV15 326 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 OVCA2Q8WZ82 227 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 GPN1Q9HCN4 374 aaPredicted RBP14.09□□□□□ -0.15
PTBP1-201ENST00000349038 MARCH5Q9NX47 278 aa14.09□□□□□ -0.15
PTBP1-201ENST00000349038 FADS1O60427 444 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 SOCS5O75159 536 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 UBL3O95164 117 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 AP1S2P56377 157 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 RGS8P57771 180 aaPredicted RBP14.08□□□□□ -0.15
PTBP1-201ENST00000349038 TMEM69Q5SWH9 247 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 PRPF38BQ5VTL8 546 aaKnown RBP14.08□□□□□ -0.15
PTBP1-201ENST00000349038 OTPQ5XKR4 325 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 SLC22A10Q63ZE4 541 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 SPAG16Q8N0X2 631 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 DCAF4L2Q8NA75 395 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 OR1S2Q8NGQ3 325 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 GNPDA2Q8TDQ7 276 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 NDC1Q9BTX1 674 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 KLF16Q9BXK1 252 aaPredicted RBP14.08□□□□□ -0.15
PTBP1-201ENST00000349038 ENKD1Q9H0I2 346 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 TMEM38AQ9H6F2 299 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 PTTG3PQ9NZH4 202 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 PURGQ9UJV8 347 aaKnown RBP14.08□□□□□ -0.15
PTBP1-201ENST00000349038 CLEC4EQ9ULY5 219 aa14.08□□□□□ -0.15
PTBP1-201ENST00000349038 RTTNQ86VV8 2226 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 HMGN4O00479 90 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 RNF224P0DH78 156 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 UGT2B7P16662 529 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 KCNJ5P48544 419 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 GATMP50440 423 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 CAPZA1P52907 286 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 SMIM11AP58511 58 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 RAB33AQ14088 237 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 ETV3LQ6ZN32 361 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 TRAPPC5Q8IUR0 188 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 CCDC116Q8IYX3 515 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 TCEAL3Q969E4 200 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 MS4A4EQ96PG1 132 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 LYSMD1Q96S90 227 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 PTDSS2Q9BVG9 487 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 RPH3AQ9Y2J0 694 aaPredicted RBP14.08□□□□□ -0.16
PTBP1-201ENST00000349038 FAM96BQ9Y3D0 163 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 KCNE3Q9Y6H6 103 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 PLXNB3Q9ULL4 1909 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 F5H0A9 414 aaPredicted RBP14.08□□□□□ -0.16
PTBP1-201ENST00000349038 ZNF821O75541 412 aaPredicted RBP14.08□□□□□ -0.16
PTBP1-201ENST00000349038 STX11O75558 287 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 CDC123O75794 336 aaPredicted RBP14.08□□□□□ -0.16
PTBP1-201ENST00000349038 HSD3B2P26439 372 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 PPT1P50897 306 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 GAS1P54826 345 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 PITPNAQ00169 270 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 DPPA4Q7L190 304 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 CDH26Q8IXH8 852 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 CCDC36Q8IYA8 594 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 ZMYND19Q96E35 227 aaPredicted RBP14.08□□□□□ -0.16
PTBP1-201ENST00000349038 BRF2Q9HAW0 419 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 MEPEQ9NQ76 525 aaPredicted RBP14.08□□□□□ -0.16
PTBP1-201ENST00000349038 SEMA4GQ9NTN9 838 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 PLEKHM1Q9Y4G2 1056 aa14.08□□□□□ -0.16
PTBP1-201ENST00000349038 A0A1B0GVT2 93 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 F5H5P2 479 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 H0YIV9 168 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 SCAMP1O15126 338 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 POP7O75817 140 aaKnown RBP14.07□□□□□ -0.16
PTBP1-201ENST00000349038 ACAA1P09110 424 aaPredicted RBP14.07□□□□□ -0.16
PTBP1-201ENST00000349038 IMPA1P29218 277 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 CSF2RBP32927 897 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 THBS2P35442 1172 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 PTGFRP43088 359 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 ART1P52961 327 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 SMAD2Q15796 467 aaKnown RBP14.07□□□□□ -0.16
PTBP1-201ENST00000349038 CPXM2Q8N436 756 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 OR14A16Q8NHC5 309 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 CHST6Q9GZX3 395 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 ZMAT3Q9HA38 289 aaKnown RBP14.07□□□□□ -0.16
PTBP1-201ENST00000349038 OR2S2Q9NQN1 319 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 GSN-AS1Q9NRJ2 163 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 SPHK1Q9NYA1 384 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 SPEGQ15772 3267 aa14.07□□□□□ -0.16
PTBP1-201ENST00000349038 SCN3AQ9NY46 2000 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms