RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ZNF517Q6ZMY9 492 aaPredicted RBP14.24□□□□□ -0.13
UPF3B-202ENST00000345865 GRAMD2AQ8IUY3 354 aa14.24□□□□□ -0.13
UPF3B-202ENST00000345865 UBE2J2Q8N2K1 259 aa14.24□□□□□ -0.13
UPF3B-202ENST00000345865 ABHD8Q96I13 439 aa14.24□□□□□ -0.13
UPF3B-202ENST00000345865 MCCC2Q9HCC0 563 aa14.24□□□□□ -0.13
UPF3B-202ENST00000345865 WSB2Q9NYS7 404 aaPredicted RBP14.24□□□□□ -0.13
UPF3B-202ENST00000345865 POLHQ9Y253 713 aa14.24□□□□□ -0.13
UPF3B-202ENST00000345865 TMEM5Q9Y2B1 443 aa14.24□□□□□ -0.13
UPF3B-202ENST00000345865 DAPL1A0PJW8 107 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 FAM86C2PA6NEL3 165 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 GNB5O14775 395 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 TFECO14948 347 aaPredicted RBP14.23□□□□□ -0.13
UPF3B-202ENST00000345865 COQ9O75208 318 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 CCNKO75909 580 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 RPS7P62081 194 aaKnown RBP14.23□□□□□ -0.13
UPF3B-202ENST00000345865 ALG10BQ5I7T1 473 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 FAM27D1Q5T7N8 215 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 UTS2BQ765I0 119 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 OAFQ86UD1 273 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 OR6F1Q8NGZ6 308 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 NECTIN4Q96NY8 510 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 MAP3K3Q99759 626 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 ADGRL4Q9HBW9 690 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 C14orf105Q9NVL8 296 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 SLC35A3Q9Y2D2 325 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 RBMX2Q9Y388 322 aaKnown RBP14.23□□□□□ -0.13
UPF3B-202ENST00000345865 NPIPB9F8W1W9 429 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 PRKNO60260 465 aaPredicted RBP14.23□□□□□ -0.13
UPF3B-202ENST00000345865 PPP3R1P63098 170 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 E2F1Q01094 437 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 BDH1Q02338 343 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 ZNF85Q03923 595 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 RPL13AP3Q6NVV1 102 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 KIRREL2Q6UWL6 708 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 RBM18Q96H35 190 aaKnown RBP14.23□□□□□ -0.13
UPF3B-202ENST00000345865 B3GAT2Q9NPZ5 323 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 GRIP1Q9Y3R0 1128 aa14.23□□□□□ -0.13
UPF3B-202ENST00000345865 TMEM184BQ9Y519 407 aaPredicted RBP14.23□□□□□ -0.13
UPF3B-202ENST00000345865 A0A1W2PPC4 97 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 SLC22A31A6NKX4 558 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 LRRN3E7EW58 273 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 HCN1O60741 890 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 SBK2P0C263 348 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 CT45A8P0DMV1 189 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 CT45A9P0DMV2 189 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 CHRNB1P11230 501 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 EVX1P49640 407 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 CRYZQ08257 329 aaKnown RBP14.22□□□□□ -0.13
UPF3B-202ENST00000345865 STX4Q12846 297 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 ZNF267Q14586 743 aaPredicted RBP14.22□□□□□ -0.13
UPF3B-202ENST00000345865 CT45A2Q5DJT8 189 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 LINC00114Q6XXX2 140 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 SSX6Q7RTT6 188 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 PARGQ86W56 976 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 RFLNBQ8N5W9 214 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 LSMEM1Q8N8F7 131 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 Q8N9G6 341 aaPredicted RBP14.22□□□□□ -0.13
UPF3B-202ENST00000345865 C17orf47Q8NEP4 570 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 OR5W2Q8NH69 310 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 KIAA1143Q96AT1 154 aaPredicted RBP14.22□□□□□ -0.13
UPF3B-202ENST00000345865 LRRN3Q9H3W5 708 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 LRIT1Q9P2V4 623 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 FBXL21Q9UKT6 434 aa14.22□□□□□ -0.13
UPF3B-202ENST00000345865 CSF2P04141 144 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 MAOAP21397 527 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 GPR3P46089 330 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 RPTNQ6XPR3 784 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 RAB43Q86YS6 212 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 CADM2Q8N3J6 435 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 DEFB119Q8N690 84 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 METTL27Q8N6F8 245 aaPredicted RBP14.21□□□□□ -0.13
UPF3B-202ENST00000345865 LRRC17Q8N6Y2 441 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 OR4C3Q8NH37 302 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 OR4C6Q8NH72 309 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 KLHDC7BQ96G42 594 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 A0A0B4J293 547 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 MEIOCA2RUB1 952 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 CTNSO60931 367 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 RGS9O75916 674 aaPredicted RBP14.21□□□□□ -0.13
UPF3B-202ENST00000345865 PEPDP12955 493 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 RNH1P13489 461 aaKnown RBP14.21□□□□□ -0.13
UPF3B-202ENST00000345865 SHC1P29353 583 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 KIR2DL3P43628 341 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 HCCSP53701 268 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 OR12D2P58182 307 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 IGLV3-21P80748 117 aaPredicted RBP14.21□□□□□ -0.13
UPF3B-202ENST00000345865 FGFBP1Q14512 234 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 ZNHIT3Q15649 155 aaPredicted RBP14.21□□□□□ -0.13
UPF3B-202ENST00000345865 ARL9Q6T311 187 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 ARL14Q8N4G2 192 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 RNF31Q96EP0 1072 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 AHCYL2Q96HN2 611 aaKnown RBP14.21□□□□□ -0.13
UPF3B-202ENST00000345865 SLC22A4Q9H015 551 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 NPAP1Q9NZP6 1156 aa14.21□□□□□ -0.13
UPF3B-202ENST00000345865 RIIAD1A6NNX1 92 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 WNT1P04628 370 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 GALP22466 123 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF141Q15928 474 aa14.2□□□□□ -0.14
UPF3B-202ENST00000345865 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms