RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KLHL15Q96M94 604 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 CDCP1Q9H5V8 836 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 KCNS2Q9ULS6 477 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 CDHR4A6H8M9 788 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 ACOD1A6NK06 481 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 H7C1Q1 480 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 FABP1P07148 127 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 ARAFP10398 606 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 CNR1P21554 472 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 CLDN6P56747 220 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 BCL2A1Q16548 175 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 TRAM1L1Q8N609 369 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 FRMD1Q8N878 549 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 GHSRQ92847 366 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 SLC25A32Q9H2D1 315 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 YIPF1Q9Y548 306 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 WASH4PA8MWX3 477 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 KIAA0355O15063 1070 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 NR2C1P13056 603 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 ARL3P36405 182 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 CLRN1P58418 232 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 RING1Q06587 406 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 RPE65Q16518 533 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 C7orf61Q8IZ16 206 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 BTBD2Q9BX70 525 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 TSPAN10Q9H1Z9 355 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 NELFAQ9H3P2 528 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 A0A1W2PQ45 241 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 A0A1W2PQY0 241 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 TCRBV5S2A0A599 114 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 DVL2O14641 736 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 HCRTR2O43614 444 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 ATP1B1P05026 303 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 F3P13726 295 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 HLA-FP30511 346 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 NR0B1P51843 470 aaKnown RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 UBE2IP63279 158 aaKnown RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 CLLU1Q5K131 121 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 SLC6A19Q695T7 634 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 FAM83HQ6ZRV2 1179 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 NPAS4Q8IUM7 802 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 DNAAF1Q8NEP3 725 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 MDGA1Q8NFP4 955 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 OR8J2Q8NGG1 315 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 GPR78Q96P69 363 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 DPH7Q9BTV6 452 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 SEMA4GQ9NTN9 838 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 BACE2Q9Y5Z0 518 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 TUBAL3A6NHL2 446 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 NXNL2Q5VZ03 156 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 PLPP4Q5VZY2 271 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 DLEU7Q6UYE1 221 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 OR4N5Q8IXE1 308 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 BBS1Q8NFJ9 593 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 YIPF5Q969M3 257 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 SLIRPQ9GZT3 109 aaKnown RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 SRRQ9GZT4 340 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF175Q9Y473 711 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 CRTAPO75718 401 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 PLGP00747 810 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 ACSM4P0C7M7 580 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 CTNNB1P35222 781 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 KIR2DL3P43628 341 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 HENMT1Q5T8I9 393 aaKnown RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 PLA2G15Q8NCC3 412 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 HOXB13Q92826 284 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 TAAR8Q969N4 342 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 HHIPL1Q96JK4 782 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 MED20Q9H944 212 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 NRIP3Q9NQ35 241 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF140P52738 457 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 KCTD11Q693B1 232 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 RPL22L1Q6P5R6 122 aaKnown RBP11.35□□□□□ -0.59
COL12A1-202ENST00000345356 SLC38A6Q8IZM9 456 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 HAVCR2Q8TDQ0 301 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 ZDHHC12Q96GR4 267 aa11.35□□□□□ -0.59
COL12A1-202ENST00000345356 IMPA2O14732 288 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 HTR3BO95264 441 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 OR2B8PP59922 312 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 TSPAN31Q12999 210 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 DEFB134Q4QY38 66 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 OR51T1Q8NGJ9 327 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 FAM213BQ8TBF2 198 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 PGAM5Q96HS1 289 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ENY2Q9NPA8 101 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 DMRT3Q9NQL9 472 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 REV1Q9UBZ9 1251 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 AGAP14A8MT82 685 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SEC14L5O43304 696 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 AK1P00568 194 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 EPHA5P54756 1037 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 TNK1Q13470 666 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 HORMAD2Q8N7B1 307 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 CCDC71LQ8N9Z2 235 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms